RNA–Protein interactions for RNA: ENST00000518590.1

AC104561.3-201, humanhuman

TSL 5 BASIC

Gene AC104561.3, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104561.3-201ENST00000518590 TIGARQ9NQ88 270 aa12.8□□□□□ -0.36
AC104561.3-201ENST00000518590 EXOSC3Q9NQT5 275 aaKnown RBP12.8□□□□□ -0.36
AC104561.3-201ENST00000518590 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.8□□□□□ -0.36
AC104561.3-201ENST00000518590 ACER3Q9NUN7 267 aa12.8□□□□□ -0.36
AC104561.3-201ENST00000518590 EMC9Q9Y3B6 208 aa12.8□□□□□ -0.36
AC104561.3-201ENST00000518590 A0A1W2PPR1 153 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 AGAP5A6NIR3 686 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 C16orf97H3BN30 126 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 ADAM11O75078 769 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 CYP7B1O75881 506 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 KRT75O95678 551 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 PLGP00747 810 aaPredicted RBP12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 CHRM4P08173 479 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 PABPC4LP0CB38 370 aaKnown RBP12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 AGTR1P30556 359 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 ANXA11P50995 505 aaKnown RBP12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 CCR4P51679 360 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 POLR2JP52435 117 aaKnown RBP12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 CTBP2P56545 445 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 RAC3P60763 192 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 RNPS1Q15287 305 aaKnown RBP12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 PPP4R4Q6NUP7 873 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 C22orf34Q6ZV56 151 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 PLEKHM3Q6ZWE6 761 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 HMGN2P46Q86SG4 172 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 MIER2Q8N344 545 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 PNPT1Q8TCS8 783 aaKnown RBP12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 LRRC8CQ8TDW0 803 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 TMEM234Q8WY98 164 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 PMM1Q92871 262 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 ITCHQ96J02 903 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 QRSL1Q9H0R6 528 aaKnown RBP12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 CXXC4Q9H2H0 198 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 MTHFD2LQ9H903 347 aaPredicted RBP12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 GP6Q9HCN6 339 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 RAI1Q7Z5J4 1906 aaPredicted RBP12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 FREM1Q5H8C1 2179 aa12.79□□□□□ -0.36
AC104561.3-201ENST00000518590 A0A1W2PNR3 127 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 FAM234BA2RU67 622 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 CLDN24A6NM45 220 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 HMGB1P1B2RPK0 211 aaPredicted RBP12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 CASKO14936 926 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 SIAH2O43255 324 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 HOXB9P17482 250 aaPredicted RBP12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 CRYGSP22914 178 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 IDH3AP50213 366 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 ART1P52961 327 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 C3orf33Q6P1S2 294 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 FCRLAQ7L513 359 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 HDXQ7Z353 690 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 CMIPQ8IY22 773 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 ATP6V1C2Q8NEY4 427 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 ABHD3Q8WU67 409 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 CNOT9Q92600 299 aaKnown RBP12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 GTF2H4Q92759 462 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 VPS33AQ96AX1 596 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 FOXC2Q99958 501 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 EBF4Q9BQW3 602 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 CCDC28BQ9BUN5 200 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 CCDC106Q9BWC9 280 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 RMND5AQ9H871 391 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 TPT1P8Q9HAU6 139 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 TCF7L2Q9NQB0 619 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 CCM2LQ9NUG4 571 aaPredicted RBP12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 KLHL28Q9NXS3 571 aa12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 ING1Q9UK53 422 aaPredicted RBP12.78□□□□□ -0.36
AC104561.3-201ENST00000518590 MED13LQ71F56 2210 aa12.77□□□□□ -0.36
AC104561.3-201ENST00000518590 ABCA4P78363 2273 aa12.77□□□□□ -0.36
AC104561.3-201ENST00000518590 DEFB108AA8MXU0 73 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 PRKD3O94806 890 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 TFPTP0C1Z6 253 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 ENPP1P22413 925 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 APOBEC1P41238 236 aaKnown RBP12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 KCNJ5P48544 419 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 HPCAP84074 193 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 MERTKQ12866 999 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 POU4F3Q15319 338 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 GTDC1Q4AE62 458 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 PAMR1Q6UXH9 720 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 STAC2Q6ZMT1 411 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 BEND4Q6ZU67 534 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 FUNDC1Q8IVP5 155 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 SLC43A2Q8N370 569 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 MBD6Q96DN6 1003 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 REXO5Q96IC2 774 aaKnown RBP12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 PAIP1Q9H074 479 aaKnown RBP12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 BCO1Q9HAY6 547 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 SLC52A3Q9NQ40 469 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 SERINC1Q9NRX5 453 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 KLHL13Q9P2N7 655 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 EDARQ9UNE0 448 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 DSPPQ9NZW4 1301 aa12.77□□□□□ -0.37
AC104561.3-201ENST00000518590 PRRC2AP48634 2157 aaKnown RBP12.76□□□□□ -0.37
AC104561.3-201ENST00000518590 FAAHO00519 579 aa12.76□□□□□ -0.37
AC104561.3-201ENST00000518590 SMAD9O15198 467 aaKnown RBP12.76□□□□□ -0.37
AC104561.3-201ENST00000518590 POLR3GO15318 223 aaPredicted RBP12.76□□□□□ -0.37
AC104561.3-201ENST00000518590 ATE1O95260 518 aa12.76□□□□□ -0.37
AC104561.3-201ENST00000518590 ANP32DO95626 131 aa12.76□□□□□ -0.37
AC104561.3-201ENST00000518590 DBIP07108 87 aaKnown RBP12.76□□□□□ -0.37
AC104561.3-201ENST00000518590 THBDP07204 575 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms