RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 CMTM8Q8IZV2 173 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC7A5P1Q8MH63 180 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PELI3Q8N2H9 469 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CENPSQ8N2Z9 138 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 MUC20Q8N307 709 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ARHGAP18Q8N392 663 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PARP8Q8N3A8 854 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PGBD5Q8N414 524 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 KIF2BQ8N4N8 673 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 FAM89BQ8N5H3 189 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 JAGN1Q8N5M9 183 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RNF10Q8N5U6 811 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TEX26Q8N6G2 289 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 GVQW1Q8N7I0 195 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF781Q8N8C0 355 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 C15orf54Q8N8G6 183 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 C8orf31Q8N9H6 132 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 MFSD9Q8NBP5 474 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 POC1AQ8NBT0 407 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 INO80EQ8NBZ0 244 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NECAP1Q8NC96 275 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CCDC197Q8NCU1 140 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TTC21AQ8NDW8 1320 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CHDHQ8NE62 594 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 FBXO36Q8NEA4 188 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CCDC112Q8NEF3 446 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ACVR1CQ8NER5 493 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PROKR2Q8NFJ6 384 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR7A2PQ8NGA2 310 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR4F6Q8NGB9 312 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR11H4Q8NGC9 324 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR8J2Q8NGG1 315 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR4C15Q8NGM1 316 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR4A4PQ8NGN8 299 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR9G4Q8NGQ1 327 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR1L6Q8NGR2 347 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR13C5Q8NGS8 318 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR6N2Q8NGY6 317 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR52N5Q8NH56 324 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR1F12Q8NHA8 337 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OLIG1Q8TAK6 271 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ERMNQ8TAM6 284 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 FGFBP3Q8TAT2 258 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 UBA3Q8TBC4 463 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NANPQ8TBE9 248 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ARRDC2Q8TBH0 407 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF596Q8TC21 504 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 FANK1Q8TC84 345 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 FBXO25Q8TCJ0 367 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 MRAPQ8TCY5 172 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CD99L2Q8TCZ2 262 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 MAGEE2Q8TD90 523 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SNED1Q8TER0 1413 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 LRRC15Q8TF66 581 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 AENQ8WTP8 325 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SMAP2Q8WU79 429 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PHLDA1Q8WV24 401 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM239Q8WW34 195 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PIH1D2Q8WWB5 315 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CAPSLQ8WWF8 208 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 IL1F10Q8WWZ1 152 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 HTR3CQ8WXA8 447 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ING5Q8WYH8 240 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 HSD17B8Q92506 261 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 FAM3CQ92520 227 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NRGNQ92686 78 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RND1Q92730 232 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ESR2Q92731 530 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 GTF2H4Q92759 462 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TANKQ92844 425 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RPL3LQ92901 407 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SMARCD2Q92925 531 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 BADQ92934 168 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 DLX4Q92988 240 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NAT6Q93015 286 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 STMN2Q93045 179 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 UBE2E3Q969T4 207 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC35C1Q96A29 364 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ADIPOR1Q96A54 375 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 FAM131CQ96AQ9 280 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CCDC127Q96BQ5 260 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 S100PBPQ96BU1 408 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 UPRTQ96BW1 309 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PPP1R14BQ96C90 147 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CXorf40BQ96DE9 158 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NXPE2Q96DL1 559 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ASB9Q96DX5 294 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 FAM122AQ96E09 287 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PELI1Q96FA3 418 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC47A1Q96FL8 570 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SDSLQ96GA7 329 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PPP1R16AQ96I34 528 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TXNDC15Q96J42 360 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CYYR1Q96J86 154 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PLEKHA8Q96JA3 519 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF514Q96K75 400 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CAPNS2Q96L46 248 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CXorf58Q96LI9 332 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 C9orf72Q96LT7 481 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 C10orf90Q96M02 699 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms