RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 OR3A2P47893 321 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 C21orf58P58505 322 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 ZNF117Q03924 483 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 KRTAP1-1Q07627 177 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 FOXF1Q12946 379 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 LASP1Q14847 261 aaKnown RBP11.15□□□□□ -0.62
VEGFA-216ENST00000512683 BHLHA15Q7RTS1 189 aaPredicted RBP11.15□□□□□ -0.62
VEGFA-216ENST00000512683 DTX2Q86UW9 622 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 ZNF781Q8N8C0 355 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 SFXN5Q8TD22 340 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 ZFP90Q8TF47 636 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 TMEM234Q8WY98 164 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 CDS1Q92903 461 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 TUBGCP3Q96CW5 907 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 SORT1Q99523 831 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 SRXN1Q9BYN0 137 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 TRIM2Q9C040 744 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 NMUR2Q9GZQ4 415 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 SLCO5A1Q9H2Y9 848 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 SSU72Q9NP77 194 aaKnown RBP11.15□□□□□ -0.62
VEGFA-216ENST00000512683 GPATCH2Q9NW75 528 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 CISD1Q9NZ45 108 aaKnown RBP11.15□□□□□ -0.62
VEGFA-216ENST00000512683 ADAM21Q9UKJ8 722 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 CARD8Q9Y2G2 431 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 KCNE3Q9Y6H6 103 aa11.15□□□□□ -0.62
VEGFA-216ENST00000512683 DPRXA6NFQ7 191 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 ZNF264O43296 627 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 CYTIPO60759 359 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 C6orf47O95873 294 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 SERPINE1P05121 402 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 ENPP1P22413 925 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 CLK1P49759 484 aaKnown RBP11.14□□□□□ -0.63
VEGFA-216ENST00000512683 CLDN8P56748 225 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 ABCE1P61221 599 aaKnown RBP11.14□□□□□ -0.63
VEGFA-216ENST00000512683 CSNK2A1P68400 391 aaPredicted RBP11.14□□□□□ -0.63
VEGFA-216ENST00000512683 EMX2Q04743 252 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 CBFBQ13951 182 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 PPA1Q15181 289 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 CHI3L2Q15782 390 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 PGGHGQ32M88 737 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 DCST2Q5T1A1 773 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 AGAP6Q5VW22 663 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 CBLN3Q6UW01 205 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 ST8SIA1Q92185 356 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 ZBTB9Q96C00 473 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 ADAD1Q96M93 576 aaKnown RBP11.14□□□□□ -0.63
VEGFA-216ENST00000512683 HS6ST2Q96MM7 605 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 ZIM3Q96PE6 472 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 PSD2Q9BQI7 771 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 RHNO1Q9BSD3 238 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 TRAF4Q9BUZ4 470 aaPredicted RBP11.14□□□□□ -0.63
VEGFA-216ENST00000512683 LAT2Q9GZY6 243 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 ASIC5Q9NY37 505 aa11.14□□□□□ -0.63
VEGFA-216ENST00000512683 ZANQ9Y493 2812 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 DSCAMO60469 2012 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 GPR171O14626 319 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 TM9SF1O15321 606 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 DNPH1O43598 174 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 AGR2O95994 175 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 GGT1P19440 569 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 SHC1P29353 583 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 HBA1P69905 142 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 BSPH1Q075Z2 132 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 RASGEF1BQ0VAM2 473 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 PDCD2Q16342 344 aaPredicted RBP11.13□□□□□ -0.63
VEGFA-216ENST00000512683 SMU1Q2TAY7 513 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 HMBOX1Q6NT76 420 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 C3orf33Q6P1S2 294 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 TMPPEQ6ZT21 453 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 GALNT5Q7Z7M9 940 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 SLC25A43Q8WUT9 341 aaPredicted RBP11.13□□□□□ -0.63
VEGFA-216ENST00000512683 TMEM158Q8WZ71 300 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 CHMP6Q96FZ7 201 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 PPP1R36Q96LQ0 422 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 SDF2Q99470 211 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 DUSP26Q9BV47 211 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 BHLHE41Q9C0J9 482 aaPredicted RBP11.13□□□□□ -0.63
VEGFA-216ENST00000512683 COQ10BQ9H8M1 238 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 AKTIPQ9H8T0 292 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 NOP53Q9NZM5 478 aaKnown RBP11.13□□□□□ -0.63
VEGFA-216ENST00000512683 EMC3Q9P0I2 261 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 HAO1Q9UJM8 370 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 ING1Q9UK53 422 aaPredicted RBP11.13□□□□□ -0.63
VEGFA-216ENST00000512683 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.13□□□□□ -0.63
VEGFA-216ENST00000512683 RAP2CQ9Y3L5 183 aa11.13□□□□□ -0.63
VEGFA-216ENST00000512683 MAGED1Q9Y5V3 778 aaPredicted RBP11.13□□□□□ -0.63
VEGFA-216ENST00000512683 SPIN1Q9Y657 262 aaPredicted RBP11.13□□□□□ -0.63
VEGFA-216ENST00000512683 FREM1Q5H8C1 2179 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 IGKV3D-15A0A087WSY6 115 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 SERINC4A6NH21 518 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 OR5H1A6NKK0 313 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 A8MV72 311 aaPredicted RBP11.12□□□□□ -0.63
VEGFA-216ENST00000512683 ANKRD28O15084 1053 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 OIP5O43482 229 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 CD8AP01732 235 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 UBL4AP11441 157 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 BMP4P12644 408 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 PGCP20142 388 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 COX5AP20674 150 aa11.12□□□□□ -0.63
VEGFA-216ENST00000512683 BGNP21810 368 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms