RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 MERTKQ12866 999 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 ITGADQ13349 1161 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 P2RY6Q15077 328 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 ZNF141Q15928 474 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 ANXA8L1Q5VT79 327 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 C3orf33Q6P1S2 294 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 BHLHA15Q7RTS1 189 aaPredicted RBP13.67□□□□□ -0.22
TPM3-219ENST00000509409 ANKRD46Q86W74 232 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 ZNF563Q8TA94 476 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 TMEM234Q8WY98 164 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 ZIM3Q96PE6 472 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 TMEM204Q9BSN7 226 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 CENPHQ9H3R5 247 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 SERHL2Q9H4I8 314 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 ESRP2Q9H6T0 727 aaKnown RBP13.67□□□□□ -0.22
TPM3-219ENST00000509409 ASIC5Q9NY37 505 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 RNF115Q9Y4L5 304 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 PRSS51A0A1B0GVH4 220 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 ESPNB1AK53 854 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 ZNF814B7Z6K7 855 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 TMCC2O75069 709 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 UGT2B17O75795 530 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 AGR2O95994 175 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 TFPIP10646 304 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 UQCRC2P22695 453 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 PCSK6P29122 969 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 SLC1A6P48664 564 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 RPL14P50914 215 aaKnown RBP13.66□□□□□ -0.22
TPM3-219ENST00000509409 RPS4XP62701 263 aaKnown RBP13.66□□□□□ -0.22
TPM3-219ENST00000509409 SKP2Q13309 424 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 TAB1Q15750 504 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 STK11Q15831 433 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 NCMAPQ5T1S8 102 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 TNFAIP8L2Q6P589 184 aaPredicted RBP13.66□□□□□ -0.22
TPM3-219ENST00000509409 ZNF100Q8IYN0 542 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 OR8J2Q8NGG1 315 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 ST8SIA1Q92185 356 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 USB1Q9BQ65 265 aaKnown RBP13.66□□□□□ -0.22
TPM3-219ENST00000509409 PSD2Q9BQI7 771 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 TMEM109Q9BVC6 243 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 KCNK9Q9NPC2 374 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.66□□□□□ -0.22
TPM3-219ENST00000509409 KCNE5Q9UJ90 142 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.66□□□□□ -0.22
TPM3-219ENST00000509409 RAP2CQ9Y3L5 183 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 WDR45Q9Y484 360 aa13.66□□□□□ -0.22
TPM3-219ENST00000509409 V9GYY5 206 aaPredicted RBP13.66□□□□□ -0.22
TPM3-219ENST00000509409 ROS1P08922 2347 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 DSCAMO60469 2012 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 SULT2B1O00204 365 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 BIRC5O15392 142 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 CYTIPO60759 359 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 LYZL6O75951 148 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 H6PDO95479 791 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 FESP07332 822 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 PAX1P15863 534 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 RYKP34925 604 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 CHI3L1P36222 383 aaPredicted RBP13.65□□□□□ -0.22
TPM3-219ENST00000509409 OR3A2P47893 321 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 CSNK2A1P68400 391 aaPredicted RBP13.65□□□□□ -0.22
TPM3-219ENST00000509409 PPP2R2BQ00005 443 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 TMPPEQ6ZT21 453 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 Q6ZT83 130 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.65□□□□□ -0.22
TPM3-219ENST00000509409 RAB8BQ92930 207 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 FBXW5Q969U6 566 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 GTPBP3Q969Y2 492 aaKnown RBP13.65□□□□□ -0.22
TPM3-219ENST00000509409 TRMT61AQ96FX7 289 aaKnown RBP13.65□□□□□ -0.22
TPM3-219ENST00000509409 ZNF300Q96RE9 604 aaPredicted RBP13.65□□□□□ -0.22
TPM3-219ENST00000509409 PAIP2Q9BPZ3 127 aaKnown RBP13.65□□□□□ -0.22
TPM3-219ENST00000509409 ZNF350Q9GZX5 532 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 BCO1Q9HAY6 547 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 ACER3Q9NUN7 267 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 ZNF701Q9NV72 531 aaPredicted RBP13.65□□□□□ -0.22
TPM3-219ENST00000509409 PRSS50Q9UI38 385 aa13.65□□□□□ -0.22
TPM3-219ENST00000509409 SPIN1Q9Y657 262 aaPredicted RBP13.65□□□□□ -0.22
TPM3-219ENST00000509409 NUP214P35658 2090 aaPredicted RBP13.65□□□□□ -0.22
TPM3-219ENST00000509409 CENPVL1A0A0U1RR11 272 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 ETV2O00321 342 aaPredicted RBP13.64□□□□□ -0.23
TPM3-219ENST00000509409 LBPP18428 481 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 S100A3P33764 101 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 APOBEC1P41238 236 aaKnown RBP13.64□□□□□ -0.23
TPM3-219ENST00000509409 DIO1P49895 249 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 NME5P56597 212 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 STX3Q13277 289 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 MAPK14Q16539 360 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 GPAT3Q53EU6 434 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 ADAM5Q6NVV9 412 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 WDR93Q6P2C0 686 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 GALNT5Q7Z7M9 940 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 UBE2J2Q8N2K1 259 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 LILRB1Q8NHL6 650 aaPredicted RBP13.64□□□□□ -0.23
TPM3-219ENST00000509409 MIPOL1Q8TD10 442 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 SMAP2Q8WU79 429 aaPredicted RBP13.64□□□□□ -0.23
TPM3-219ENST00000509409 IGFBPL1Q8WX77 278 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 NEUROG1Q92886 237 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 ZBTB9Q96C00 473 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 ROPN1LQ96C74 230 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 MUCL1Q96DR8 90 aa13.64□□□□□ -0.23
TPM3-219ENST00000509409 ZHX1-C8orf76Q96EF9 292 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms