RNA–Protein interactions for RNA: ENST00000505871.6

SH3D21-205, Transcript of SH3 domain containing 21, humanhuman

TSL 2 BASIC

Gene SH3D21, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-205ENST00000505871 SCDO00767 359 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 MYL12BO14950 172 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 FOXD2O60548 495 aaPredicted RBP13.19□□□□□ -0.3
SH3D21-205ENST00000505871 CSO75390 466 aaKnown RBP13.19□□□□□ -0.3
SH3D21-205ENST00000505871 RFPL3O75679 317 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 SCG5P05408 212 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 GSTT2P0CG29 244 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 GSTT2BP0CG30 244 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 SERPINB10P48595 397 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 CDH11P55287 796 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 COPZ1P61923 177 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 C1DQ13901 141 aaKnown RBP13.19□□□□□ -0.3
SH3D21-205ENST00000505871 NDUFAF6Q330K2 333 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 TIMM50Q3ZCQ8 353 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 NXNL2Q5VZ03 156 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 HLA-DQA1Q5Y7H0 255 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 SMARCD3Q6STE5 483 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 SLCO6A1Q86UG4 719 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 LAPTM4BQ86VI4 370 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 CACTIN-AS1Q8N1I8 211 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 LNX2Q8N448 690 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 OR1N1Q8NGS0 311 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 OR13C2Q8NGS9 318 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 ZHX1-C8orf76Q96EF9 292 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 CCDC74BQ96LY2 380 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 GAL3ST4Q96RP7 486 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 CCNL2Q96S94 520 aaPredicted RBP13.19□□□□□ -0.3
SH3D21-205ENST00000505871 TAPBPLQ9BX59 468 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 FN3KQ9H479 309 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 SYNDIG1Q9H7V2 258 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 EXOSC3Q9NQT5 275 aaKnown RBP13.19□□□□□ -0.3
SH3D21-205ENST00000505871 IL20RAQ9UHF4 553 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 FBXO4Q9UKT5 387 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 PCDHGA3Q9Y5H0 932 aa13.19□□□□□ -0.3
SH3D21-205ENST00000505871 BHLHE40O14503 412 aa13.18□□□□□ -0.3
SH3D21-205ENST00000505871 TO15178 435 aa13.18□□□□□ -0.3
SH3D21-205ENST00000505871 PRKNO60260 465 aaPredicted RBP13.18□□□□□ -0.3
SH3D21-205ENST00000505871 PTP4A3O75365 173 aa13.18□□□□□ -0.3
SH3D21-205ENST00000505871 UTS2O95399 124 aa13.18□□□□□ -0.3
SH3D21-205ENST00000505871 UBL4AP11441 157 aa13.18□□□□□ -0.3
SH3D21-205ENST00000505871 CKMT1AP12532 417 aa13.18□□□□□ -0.3
SH3D21-205ENST00000505871 MYL12AP19105 171 aa13.18□□□□□ -0.3
SH3D21-205ENST00000505871 FUT1P19526 365 aa13.18□□□□□ -0.3
SH3D21-205ENST00000505871 TUBA1BP68363 451 aa13.18□□□□□ -0.3
SH3D21-205ENST00000505871 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.18□□□□□ -0.3
SH3D21-205ENST00000505871 TSTQ16762 297 aaKnown RBP13.18□□□□□ -0.3
SH3D21-205ENST00000505871 TUBA1AQ71U36 451 aa13.18□□□□□ -0.3
SH3D21-205ENST00000505871 C9orf40Q8IXQ3 194 aa13.18□□□□□ -0.3
SH3D21-205ENST00000505871 STT3BQ8TCJ2 826 aa13.18□□□□□ -0.3
SH3D21-205ENST00000505871 OPALINQ96PE5 141 aa13.18□□□□□ -0.3
SH3D21-205ENST00000505871 A0A087WUJ7 227 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 SCRG1O75711 98 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 SLC29A4Q7RTT9 530 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 IFI44Q8TCB0 444 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 WWTR1Q9GZV5 400 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 ICAM5Q9UMF0 924 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 BAIAP2Q9UQB8 552 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 EXOSC1Q9Y3B2 195 aaKnown RBP13.17□□□□□ -0.3
SH3D21-205ENST00000505871 ADAMTS9Q9P2N4 1935 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 PATE3B3GLJ2 98 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 ARHGAP33O14559 1287 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 NADKO95544 446 aaPredicted RBP13.17□□□□□ -0.3
SH3D21-205ENST00000505871 NGFRP08138 427 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 HBQ1P09105 142 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 HTR1FP30939 366 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 LIMK1P53667 647 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 DAB2P98082 770 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 CRYZQ08257 329 aaKnown RBP13.17□□□□□ -0.3
SH3D21-205ENST00000505871 MLLT11Q13015 90 aaPredicted RBP13.17□□□□□ -0.3
SH3D21-205ENST00000505871 SKP2Q13309 424 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 CD226Q15762 336 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 NKAIN1Q4KMZ8 207 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 TRIM61Q5EBN2 209 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 SLC23A3Q6PIS1 610 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 USP43Q70EL4 1123 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 ATCAYQ86WG3 371 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 GID4Q8IVV7 300 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 KBTBD8Q8NFY9 601 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 VMP1Q96GC9 406 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 OR51E2Q9H255 320 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 DCSTAMPQ9H295 470 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 HINT3Q9NQE9 182 aaKnown RBP13.17□□□□□ -0.3
SH3D21-205ENST00000505871 H2AFY2Q9P0M6 372 aaPredicted RBP13.17□□□□□ -0.3
SH3D21-205ENST00000505871 OSGIN1Q9UJX0 560 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 TECTAO75443 2155 aa13.17□□□□□ -0.3
SH3D21-205ENST00000505871 TMEM129A0AVI4 362 aa13.16□□□□□ -0.3
SH3D21-205ENST00000505871 FAM86C2PA6NEL3 165 aa13.16□□□□□ -0.3
SH3D21-205ENST00000505871 ZNF264O43296 627 aa13.16□□□□□ -0.3
SH3D21-205ENST00000505871 REM1O75628 298 aa13.16□□□□□ -0.3
SH3D21-205ENST00000505871 TIAF1O95411 115 aa13.16□□□□□ -0.3
SH3D21-205ENST00000505871 SLC2A10O95528 541 aa13.16□□□□□ -0.3
SH3D21-205ENST00000505871 ONECUT2O95948 504 aa13.16□□□□□ -0.3
SH3D21-205ENST00000505871 ENDOUP21128 410 aaKnown RBP13.16□□□□□ -0.3
SH3D21-205ENST00000505871 IL12BP29460 328 aa13.16□□□□□ -0.3
SH3D21-205ENST00000505871 ETV5P41161 510 aa13.16□□□□□ -0.3
SH3D21-205ENST00000505871 EIF2B2P49770 351 aaKnown RBP13.16□□□□□ -0.3
SH3D21-205ENST00000505871 ETV1P50549 477 aa13.16□□□□□ -0.3
SH3D21-205ENST00000505871 DUSP3P51452 185 aaPredicted RBP13.16□□□□□ -0.3
SH3D21-205ENST00000505871 PSPHP78330 225 aa13.16□□□□□ -0.3
SH3D21-205ENST00000505871 DOC2BQ14184 412 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms