RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 TMEM176BQ3YBM2 270 aaPredicted RBP15.59■□□□□ 0.09
MDC1-206ENST00000489540 MRPL2Q5T653 305 aaKnown RBP15.59■□□□□ 0.09
MDC1-206ENST00000489540 HBMQ6B0K9 141 aa15.59■□□□□ 0.09
MDC1-206ENST00000489540 PLXDC2Q6UX71 529 aa15.59■□□□□ 0.09
MDC1-206ENST00000489540 RELL2Q8NC24 303 aaPredicted RBP15.59■□□□□ 0.09
MDC1-206ENST00000489540 FNDC9Q8TBE3 224 aa15.59■□□□□ 0.09
MDC1-206ENST00000489540 C10orf82Q8WW14 230 aa15.59■□□□□ 0.09
MDC1-206ENST00000489540 OSTF1Q92882 214 aa15.59■□□□□ 0.09
MDC1-206ENST00000489540 MARVELD3Q96A59 401 aa15.59■□□□□ 0.09
MDC1-206ENST00000489540 ANKRD27Q96NW4 1050 aa15.59■□□□□ 0.09
MDC1-206ENST00000489540 CPPED1Q9BRF8 314 aaPredicted RBP15.59■□□□□ 0.09
MDC1-206ENST00000489540 PRRG4Q9BZD6 226 aa15.59■□□□□ 0.09
MDC1-206ENST00000489540 TMEM38AQ9H6F2 299 aa15.59■□□□□ 0.09
MDC1-206ENST00000489540 MCTS1Q9ULC4 181 aaKnown RBP15.59■□□□□ 0.09
MDC1-206ENST00000489540 SETXQ7Z333 2677 aaKnown RBP15.58■□□□□ 0.09
MDC1-206ENST00000489540 CFAP73A6NFT4 308 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 FAAHO00519 579 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 TNFSF11O14788 317 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 CCDC22O60826 627 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 PGM3O95394 542 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 SYNGR4O95473 234 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 ARAFP10398 606 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 ETS2P15036 469 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 FKBP2P26885 142 aaKnown RBP15.58■□□□□ 0.08
MDC1-206ENST00000489540 SFTPDP35247 375 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 APOBEC1P41238 236 aaKnown RBP15.58■□□□□ 0.08
MDC1-206ENST00000489540 ASCL1P50553 236 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 AGFG1P52594 562 aaKnown RBP15.58■□□□□ 0.08
MDC1-206ENST00000489540 CDK6Q00534 326 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 MERTKQ12866 999 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 FOXF2Q12947 444 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 CYLC2Q14093 348 aaPredicted RBP15.58■□□□□ 0.08
MDC1-206ENST00000489540 FBXL19-AS1Q494R0 122 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 COQ5Q5HYK3 327 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 RPS26P11Q5JNZ5 115 aaPredicted RBP15.58■□□□□ 0.08
MDC1-206ENST00000489540 RNF220Q5VTB9 566 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 REEP3Q6NUK4 255 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 PLEKHM3Q6ZWE6 761 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 GRINAQ7Z429 371 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 VRK2Q86Y07 508 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 SPATA9Q9BWV2 254 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 PIGMQ9H3S5 423 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 IKZF5Q9H5V7 419 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 RNF122Q9H9V4 155 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 SLC24A3Q9HC58 644 aa15.58■□□□□ 0.08
MDC1-206ENST00000489540 NPDC1Q9NQX5 325 aaPredicted RBP15.58■□□□□ 0.08
MDC1-206ENST00000489540 FOXD3Q9UJU5 478 aaPredicted RBP15.58■□□□□ 0.08
MDC1-206ENST00000489540 ZNF443Q9Y2A4 671 aaPredicted RBP15.58■□□□□ 0.08
MDC1-206ENST00000489540 CDHR4A6H8M9 788 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 BBIP1A8MTZ0 92 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 FBP2O00757 339 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 CXCL13O43927 109 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 NPPAP01160 153 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 IGFBP2P18065 325 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 SLC6A2P23975 617 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 PEX19P40855 299 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 HTR3AP46098 478 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 IDH2P48735 452 aaKnown RBP15.57■□□□□ 0.08
MDC1-206ENST00000489540 PLAURQ03405 335 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 MMEL1Q495T6 779 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 ZNF311Q5JNZ3 666 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 GTF2IRD2BQ6EKJ0 949 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 C3orf33Q6P1S2 294 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 MEX3BQ6ZN04 569 aaKnown RBP15.57■□□□□ 0.08
MDC1-206ENST00000489540 GTF2IRD2Q86UP8 949 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 KRT73Q86Y46 540 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 GCNT2Q8N0V5 402 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 ATP6V1C2Q8NEY4 427 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 NFKBIDQ8NI38 313 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 SH3GL1Q99961 368 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 RLIMQ9NVW2 624 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 JKAMPQ9P055 326 aa15.57■□□□□ 0.08
MDC1-206ENST00000489540 SPIN1Q9Y657 262 aaPredicted RBP15.57■□□□□ 0.08
MDC1-206ENST00000489540 PCNX3Q9H6A9 2034 aa15.56■□□□□ 0.08
MDC1-206ENST00000489540 A0A1W2PNV4 684 aa15.56■□□□□ 0.08
MDC1-206ENST00000489540 PABPC4LP0CB38 370 aaKnown RBP15.56■□□□□ 0.08
MDC1-206ENST00000489540 SHC1P29353 583 aa15.56■□□□□ 0.08
MDC1-206ENST00000489540 SLC7A1P30825 629 aa15.56■□□□□ 0.08
MDC1-206ENST00000489540 RBBP4Q09028 425 aa15.56■□□□□ 0.08
MDC1-206ENST00000489540 EPS8Q12929 822 aa15.56■□□□□ 0.08
MDC1-206ENST00000489540 ZNF836Q6ZNA1 936 aa15.56■□□□□ 0.08
MDC1-206ENST00000489540 ZNF550Q7Z398 422 aa15.56■□□□□ 0.08
MDC1-206ENST00000489540 C10orf111Q8N326 155 aa15.56■□□□□ 0.08
MDC1-206ENST00000489540 SLC25A43Q8WUT9 341 aaPredicted RBP15.56■□□□□ 0.08
MDC1-206ENST00000489540 RNASE6Q93091 150 aaKnown RBP15.56■□□□□ 0.08
MDC1-206ENST00000489540 CPNE4Q96A23 557 aaPredicted RBP15.56■□□□□ 0.08
MDC1-206ENST00000489540 REXO5Q96IC2 774 aaKnown RBP15.56■□□□□ 0.08
MDC1-206ENST00000489540 SPATA5L1Q9BVQ7 753 aa15.56■□□□□ 0.08
MDC1-206ENST00000489540 CCDC106Q9BWC9 280 aa15.56■□□□□ 0.08
MDC1-206ENST00000489540 GLRX2Q9NS18 164 aa15.56■□□□□ 0.08
MDC1-206ENST00000489540 CAPN7Q9Y6W3 813 aa15.56■□□□□ 0.08
MDC1-206ENST00000489540 LOC100653049A0A140TA62 436 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 EEF1E1-BLOC1S5C9J1V9 151 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 EEF1E1O43324 174 aaKnown RBP15.55■□□□□ 0.08
MDC1-206ENST00000489540 ADAM11O75078 769 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 TNFSF13O75888 250 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 KRT34O76011 436 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 AQP8O94778 261 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 SLC1A3P43003 542 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 CLK1P49759 484 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms