RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 hCG_1807616A0A1W2PRN6 198 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 RFXAPO00287 272 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 RD3LP0DJH9 198 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 CYBAP13498 195 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 NTHL1P78549 312 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 OTPQ5XKR4 325 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 UNQ6126/PRO20091Q6UXV3 157 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 MEPCEQ7L2J0 689 aaKnown RBP12.62□□□□□ -0.39
USP42-206ENST00000479544 RDH10Q8IZV5 341 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 OR2L2Q8NH16 312 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 S100PBPQ96BU1 408 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 TMEM41AQ96HV5 264 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 ACTR10Q9NZ32 417 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 MRTO4Q9UKD2 239 aaKnown RBP12.62□□□□□ -0.39
USP42-206ENST00000479544 ACSL5Q9ULC5 683 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 LIPT1Q9Y234 373 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 V9GYH0 126 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 TEAD1P28347 426 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 HEPHL1Q6MZM0 1159 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 QSOX2Q6ZRP7 698 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 LSRQ86X29 649 aaPredicted RBP12.62□□□□□ -0.39
USP42-206ENST00000479544 TCTE3Q8IZS6 198 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 ACOT4Q8N9L9 421 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 UBTD2Q8WUN7 234 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 KLF16Q9BXK1 252 aaPredicted RBP12.62□□□□□ -0.39
USP42-206ENST00000479544 C20orf85Q9H1P6 137 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 FN3KQ9H479 309 aa12.62□□□□□ -0.39
USP42-206ENST00000479544 TRAPPC13A5PLN9 417 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 NTN1O95631 604 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 SLC25A35Q3KQZ1 300 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 CLVS2Q5SYC1 327 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 OR5M10Q6IEU7 315 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 ZNF322Q6U7Q0 402 aaPredicted RBP12.61□□□□□ -0.39
USP42-206ENST00000479544 NLRC3Q7RTR2 1065 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 LSMEM1Q8N8F7 131 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 POTEKPQ9BYX7 375 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 CHST8Q9H2A9 424 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 HRH4Q9H3N8 390 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 ASIC5Q9NY37 505 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 IGLON5A6NGN9 336 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 FADS1O60427 444 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 CPEP16870 476 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 TYRP1P17643 537 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 PBX2P40425 430 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 ERVK-21P61565 698 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 FGL1Q08830 312 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 ENPP7Q6UWV6 458 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 FAM26EQ8N5C1 309 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 TEX19Q8NA77 164 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 TTLQ8NG68 377 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 OR52I2Q8NH67 350 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 FIBINQ8TAL6 211 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 FAM46BQ96A09 425 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 MTIF3Q9H2K0 278 aaKnown RBP12.61□□□□□ -0.39
USP42-206ENST00000479544 UBQLN3Q9H347 655 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 GLIPR2Q9H4G4 154 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 HCFC1R1Q9NWW0 138 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 MBD1Q9UIS9 605 aaPredicted RBP12.61□□□□□ -0.39
USP42-206ENST00000479544 SVILO95425 2214 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 CACNA1DQ01668 2161 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 LEUTXA8MZ59 168 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 LDB3O75112 727 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 OR8G3PP0DMU2 310 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 ZNF823P16415 610 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 PRSS3P35030 304 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 RAD52P43351 418 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 MAP2K6P52564 334 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 MVDP53602 400 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 LEG1Q6P5S2 330 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 OR7D2Q96RA2 312 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 ZNF700Q9H0M5 742 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 MIXL1Q9H2W2 232 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 TMEM38AQ9H6F2 299 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 C11orf49Q9H6J7 331 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 CERS4Q9HA82 394 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 EMC7Q9NPA0 242 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 FZD3Q9NPG1 666 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 ATG2BQ96BY7 2078 aa12.61□□□□□ -0.39
USP42-206ENST00000479544 GMDSO60547 372 aa12.6□□□□□ -0.39
USP42-206ENST00000479544 RAB3DO95716 219 aa12.6□□□□□ -0.39
USP42-206ENST00000479544 RBMS1P29558 406 aaKnown RBP12.6□□□□□ -0.39
USP42-206ENST00000479544 S100A11P31949 105 aa12.6□□□□□ -0.39
USP42-206ENST00000479544 ACTC1P68032 377 aa12.6□□□□□ -0.39
USP42-206ENST00000479544 ACTA1P68133 377 aa12.6□□□□□ -0.39
USP42-206ENST00000479544 TECPR1Q7Z6L1 1165 aa12.6□□□□□ -0.39
USP42-206ENST00000479544 DNAAF1Q8NEP3 725 aa12.6□□□□□ -0.39
USP42-206ENST00000479544 SPNS1Q9H2V7 528 aa12.6□□□□□ -0.39
USP42-206ENST00000479544 COLEC10Q9Y6Z7 277 aa12.6□□□□□ -0.39
USP42-206ENST00000479544 UBL3O95164 117 aa12.6□□□□□ -0.39
USP42-206ENST00000479544 LALBAP00709 142 aa12.6□□□□□ -0.39
USP42-206ENST00000479544 RENP00797 406 aa12.6□□□□□ -0.39
USP42-206ENST00000479544 GIMD1P0DJR0 217 aa12.6□□□□□ -0.39
USP42-206ENST00000479544 CD34P28906 385 aa12.6□□□□□ -0.39
USP42-206ENST00000479544 DLSTP36957 453 aa12.6□□□□□ -0.39
USP42-206ENST00000479544 RAP2BP61225 183 aa12.6□□□□□ -0.39
USP42-206ENST00000479544 ZNF616Q08AN1 781 aa12.6□□□□□ -0.39
USP42-206ENST00000479544 GRASPQ7Z6J2 395 aaPredicted RBP12.6□□□□□ -0.39
USP42-206ENST00000479544 LRRC46Q96FV0 321 aa12.6□□□□□ -0.39
USP42-206ENST00000479544 PTCHD1Q96NR3 888 aa12.6□□□□□ -0.39
USP42-206ENST00000479544 NOX4Q9NPH5 578 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms