RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 LHX4Q969G2 390 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 TOP1MTQ969P6 601 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 SYAP1Q96A49 352 aaPredicted RBP3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 FAM173AQ9BQD7 235 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 APOOQ9BUR5 198 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 MRPL13Q9BYD1 178 aaKnown RBP3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 TSPY26PQ9H489 355 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 ELL3Q9HB65 397 aaPredicted RBP3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 TRPV5Q9NQA5 729 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 SLC35D1Q9NTN3 355 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 ZNF346Q9UL40 294 aaKnown RBP3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 TP53TG3Q9ULZ0 132 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 DHRS7Q9Y394 339 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 RNF115Q9Y4L5 304 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 ADAMTS9Q9P2N4 1935 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 UNC80Q8N2C7 3258 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 A0A1B0GWJ7 208 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 LAD1O00515 517 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 E2F3O00716 465 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 IMPA2O14732 288 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 PI15O43692 258 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 NEMFO60524 1076 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 SRSF10O75494 262 aaKnown RBP3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 PDE5AO76074 875 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 KRT8P05787 483 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 SNRPCP09234 159 aaKnown RBP3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 NCF1P14598 390 aaPredicted RBP3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 AXLP30530 894 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 CD52P31358 61 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 PRPHP41219 470 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 QARSP47897 775 aaKnown RBP3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 IL9RQ01113 521 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 SRYQ05066 204 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 CD300CQ08708 224 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 FCHO2Q0JRZ9 810 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 CDKN3Q16667 212 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 C17orf58Q2M2W7 97 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 KRTAP13-3Q3SY46 172 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 TMEM41BQ5BJD5 291 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 ZNF343Q6P1L6 599 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 ARMCX5Q6P1M9 558 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 SLC39A4Q6P5W5 647 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 LRRC8BQ6P9F7 803 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 EMBQ6PCB8 327 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 RFWD3Q6PCD5 774 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 PAQR6Q6TCH4 344 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 P4HA3Q7Z4N8 544 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 GCNT2Q8N0V5 402 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 LRRC43Q8N309 656 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 GIPC3Q8TF64 312 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 C8orf76Q96K31 380 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 PSMB7Q99436 277 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 LXNQ9BS40 222 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 NFKBIZQ9BYH8 718 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 DHX33Q9H6R0 707 aaKnown RBP3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 COQ10BQ9H8M1 238 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 HEXA-AS1Q9H8Q6 139 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 COG4Q9H9E3 785 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 GNB4Q9HAV0 340 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 RGS18Q9NS28 235 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 CENPMQ9NSP4 180 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 NRBP2Q9NSY0 501 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 GDAP2Q9NXN4 497 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 TAS2R16Q9NYV7 291 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 SH3BGRL2Q9UJC5 107 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 KLK13Q9UKR3 277 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 BLOC1S6Q9UL45 172 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 MOB4Q9Y3A3 225 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 FKBP7Q9Y680 259 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 MTCH2Q9Y6C9 303 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 AP1M2Q9Y6Q5 423 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 PLXND1Q9Y4D7 1925 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 PHLPP2Q6ZVD8 1323 aa3.18□□□□□ -1.9
CDC42BPA-212ENST00000478573 SPAG17Q6Q759 2223 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 RALGAPA1Q6GYQ0 2036 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 TTC28Q96AY4 2481 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 CEP192Q8TEP8 1941 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 TECTAO75443 2155 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 A0A0J9YVX5 310 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 TTC26A0AVF1 554 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 EPOPA6NHQ4 379 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 RPL37AP8A6NKH3 93 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 ANGPT2O15123 496 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 CHMP2AO43633 222 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 JAK2O60674 1132 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 PEX11AO75192 247 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 NUDT14O95848 222 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 IGSF6O95976 241 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 GOT2P00505 430 aaKnown RBP3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 ANXA4P09525 319 aaPredicted RBP3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 IGFBP5P24593 272 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 CYP2F1P24903 491 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 U2AF2P26368 475 aaKnown RBP eCLIP3.17□□□□□ -1.91e-6■■■■■ 26.9
CDC42BPA-212ENST00000478573 HTR2AP28223 471 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 TRPC1P48995 793 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 SLC7A2P52569 658 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 NOP14P78316 857 aaKnown RBP3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 KLHL30Q0D2K2 578 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 BNIP1Q12981 228 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms