RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 RNPS1Q15287 305 aaKnown RBP6.22□□□□□ -1.41
HDAC3-207ENST00000475549 GPR68Q15743 365 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 PGGHGQ32M88 737 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 ARHGAP11BQ3KRB8 267 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 TNFAIP8L3Q5GJ75 292 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 TMEM201Q5SNT2 666 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 PDSS1Q5T2R2 415 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 GTF2IRD2BQ6EKJ0 949 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 TYW3Q6IPR3 259 aaKnown RBP6.22□□□□□ -1.41
HDAC3-207ENST00000475549 ADAM5Q6NVV9 412 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.22□□□□□ -1.41
HDAC3-207ENST00000475549 HMGN2P46Q86SG4 172 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 GTF2IRD2Q86UP8 949 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 ANKRD46Q86W74 232 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 NUDCD3Q8IVD9 361 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 NATD1Q8N6N6 113 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 ZNF527Q8NB42 609 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 FAM71CQ8NEG0 241 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 STEAP2Q8NFT2 490 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 OR8J2Q8NGG1 315 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 PIWIL2Q8TC59 973 aaKnown RBP6.22□□□□□ -1.41
HDAC3-207ENST00000475549 MIPOL1Q8TD10 442 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 ZFP90Q8TF47 636 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 HSD17B8Q92506 261 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 RAB8BQ92930 207 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 MOAP1Q96BY2 351 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 ZNF300Q96RE9 604 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-207ENST00000475549 PRPF18Q99633 342 aaKnown RBP6.22□□□□□ -1.41
HDAC3-207ENST00000475549 MDFIQ99750 246 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 BDH2Q9BUT1 245 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 CCDC106Q9BWC9 280 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 HDHD5Q9BXW7 423 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 ZNF350Q9GZX5 532 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 LAT2Q9GZY6 243 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 SAP130Q9H0E3 1048 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 GP6Q9HCN6 339 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 TIGARQ9NQ88 270 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 ATAD3AQ9NVI7 634 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 ADAM21Q9UKJ8 722 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 LAMP3Q9UQV4 416 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 PRSS51A0A1B0GVH4 220 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 GJE1A6NN92 205 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 ZNF716A6NP11 495 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 ZNF724A8MTY0 619 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 SHISA9B4DS77 424 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 INAFM1C9JVW0 142 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 H3BNH8 94 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 CLOCKO15516 846 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 CYTIPO60759 359 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 NDUFS7O75251 213 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 STX11O75558 287 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 LYZL6O75951 148 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 PGM3O95394 542 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 SERPINE1P05121 402 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 UBTFL6P0CB48 400 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-207ENST00000475549 PTNP21246 168 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 IL12AP29459 219 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 OR3A2P47893 321 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 DIO1P49895 249 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 CCR4P51679 360 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 FOXG1P55316 489 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-207ENST00000475549 ATP5J2P56134 94 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 ABCE1P61221 599 aaKnown RBP6.21□□□□□ -1.42
HDAC3-207ENST00000475549 BSPH1Q075Z2 132 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 IFFO1Q0D2I5 559 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 RASGEF1BQ0VAM2 473 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 SELENBP1Q13228 472 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 CBFBQ13951 182 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 CASP8Q14790 479 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 P2RY6Q15077 328 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 MAPK11Q15759 364 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 CHI3L2Q15782 390 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 PDCD2Q16342 344 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-207ENST00000475549 SMU1Q2TAY7 513 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 SAXO2Q658L1 398 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 WDR93Q6P2C0 686 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 DNAJC14Q6Y2X3 702 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-207ENST00000475549 FRRS1Q6ZNA5 592 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 TMPPEQ6ZT21 453 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 Q6ZT83 130 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 STK32CQ86UX6 486 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 ADGRG3Q86Y34 549 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 SLC43A2Q8N370 569 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 ZNF614Q8N883 585 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 MAPK1IP1LQ8NDC0 245 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 TOR1AIP2Q8NFQ8 470 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 XAGE5Q8WWM1 108 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 KISS1RQ969F8 398 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-207ENST00000475549 DNAJA3Q96EY1 480 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 REXO5Q96IC2 774 aaKnown RBP6.21□□□□□ -1.42
HDAC3-207ENST00000475549 ARL5BQ96KC2 179 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 OR5B2Q96R09 309 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 TRIM2Q9C040 744 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 OR51I1Q9H343 314 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 PNPOQ9NVS9 261 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 NOP53Q9NZM5 478 aaKnown RBP6.21□□□□□ -1.42
HDAC3-207ENST00000475549 NPAP1Q9NZP6 1156 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.21□□□□□ -1.42
HDAC3-207ENST00000475549 HAO1Q9UJM8 370 aa6.21□□□□□ -1.42
HDAC3-207ENST00000475549 V9GYY5 206 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms