RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 SLCO1B3Q9NPD5 702 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 EXOSC3Q9NQT5 275 aaKnown RBP12.57□□□□□ -0.4
COMMD3-208ENST00000470045 ST6GALNAC2Q9UJ37 374 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 ITGB1BP2Q9UKP3 347 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 CLEC4AQ9UMR7 237 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 PROCRQ9UNN8 238 aa12.57□□□□□ -0.4
COMMD3-208ENST00000470045 TEP1Q99973 2627 aaKnown RBP12.57□□□□□ -0.4
COMMD3-208ENST00000470045 AGAP5A6NIR3 686 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 KRT75O95678 551 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 CHRM4P08173 479 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 POU2F1P14859 743 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 PGCP20142 388 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 AGTR1P30556 359 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 SESN3P58005 492 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 HPCAP84074 193 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 MAPK11Q15759 364 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 SYPL1Q16563 259 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 TMEM176BQ3YBM2 270 aaPredicted RBP12.56□□□□□ -0.4
COMMD3-208ENST00000470045 GPAT3Q53EU6 434 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 PPP4R4Q6NUP7 873 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 LRRC74BQ6ZQY2 392 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 CMIPQ8IY22 773 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 MIER2Q8N344 545 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 LRRC8CQ8TDW0 803 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 PMM1Q92871 262 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 SLC39A3Q9BRY0 314 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 QRSL1Q9H0R6 528 aaKnown RBP12.56□□□□□ -0.4
COMMD3-208ENST00000470045 GP6Q9HCN6 339 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 TIGARQ9NQ88 270 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 TCF7L2Q9NQB0 619 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 ACER3Q9NUN7 267 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 NDRG3Q9UGV2 375 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 DSPPQ9NZW4 1301 aa12.56□□□□□ -0.4
COMMD3-208ENST00000470045 PRRC2AP48634 2157 aaKnown RBP12.55□□□□□ -0.4
COMMD3-208ENST00000470045 A0A1W2PPR1 153 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 FAM234BA2RU67 622 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 CLDN24A6NM45 220 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 HMGB1P1B2RPK0 211 aaPredicted RBP12.55□□□□□ -0.4
COMMD3-208ENST00000470045 ADAM11O75078 769 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 CYP7B1O75881 506 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 PLGP00747 810 aaPredicted RBP12.55□□□□□ -0.4
COMMD3-208ENST00000470045 PABPC4LP0CB38 370 aaKnown RBP12.55□□□□□ -0.4
COMMD3-208ENST00000470045 HOXB9P17482 250 aaPredicted RBP12.55□□□□□ -0.4
COMMD3-208ENST00000470045 POLR2JP52435 117 aaKnown RBP12.55□□□□□ -0.4
COMMD3-208ENST00000470045 IST1P53990 364 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 CTBP2P56545 445 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 RAC3P60763 192 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 KCNJ10P78508 379 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 RNPS1Q15287 305 aaKnown RBP12.55□□□□□ -0.4
COMMD3-208ENST00000470045 TIGD2Q4W5G0 525 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 GTF2IRD2BQ6EKJ0 949 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 DNAJC14Q6Y2X3 702 aaPredicted RBP12.55□□□□□ -0.4
COMMD3-208ENST00000470045 PLEKHM3Q6ZWE6 761 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 HDXQ7Z353 690 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 GTF2IRD2Q86UP8 949 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 PNPT1Q8TCS8 783 aaKnown RBP12.55□□□□□ -0.4
COMMD3-208ENST00000470045 ABHD3Q8WU67 409 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 TMEM234Q8WY98 164 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 ROBO4Q8WZ75 1007 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 ITCHQ96J02 903 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 WFIKKN1Q96NZ8 548 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 CCDC106Q9BWC9 280 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 CXXC4Q9H2H0 198 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 RMND5AQ9H871 391 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 PLEKHF2Q9H8W4 249 aa12.55□□□□□ -0.4
COMMD3-208ENST00000470045 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.55□□□□□ -0.4
COMMD3-208ENST00000470045 RAI1Q7Z5J4 1906 aaPredicted RBP12.54□□□□□ -0.4
COMMD3-208ENST00000470045 C16orf97H3BN30 126 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 POLR3GO15318 223 aaPredicted RBP12.54□□□□□ -0.4
COMMD3-208ENST00000470045 SIAH2O43255 324 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 CRYGSP22914 178 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 SLC7A1P30825 629 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 IDH3AP50213 366 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 MERTKQ12866 999 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 GTDC1Q4AE62 458 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 PAMR1Q6UXH9 720 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 FCRLAQ7L513 359 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 HMGN2P46Q86SG4 172 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 SLC43A2Q8N370 569 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 SLC25A43Q8WUT9 341 aaPredicted RBP12.54□□□□□ -0.4
COMMD3-208ENST00000470045 STON2Q8WXE9 905 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 CNOT9Q92600 299 aaKnown RBP12.54□□□□□ -0.4
COMMD3-208ENST00000470045 GTF2H4Q92759 462 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 VPS33AQ96AX1 596 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 KCTD12Q96CX2 325 aaKnown RBP12.54□□□□□ -0.4
COMMD3-208ENST00000470045 FOXC2Q99958 501 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 EBF4Q9BQW3 602 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 CCDC28BQ9BUN5 200 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 MTHFD2LQ9H903 347 aaPredicted RBP12.54□□□□□ -0.4
COMMD3-208ENST00000470045 TPT1P8Q9HAU6 139 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 KLHL28Q9NXS3 571 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 KLHL13Q9P2N7 655 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 FREM1Q5H8C1 2179 aa12.54□□□□□ -0.4
COMMD3-208ENST00000470045 A0A1W2PNR3 127 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 DEFB108AA8MXU0 73 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 FAAHO00519 579 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 SMAD9O15198 467 aaKnown RBP12.53□□□□□ -0.4
COMMD3-208ENST00000470045 NR2F1P10589 423 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 ETFAP13804 333 aa12.53□□□□□ -0.4
COMMD3-208ENST00000470045 CD1EP15812 388 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms