RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 BBS1Q8NFJ9 593 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 OR5T3Q8NGG3 340 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 YIPF6Q96EC8 236 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 ZNF350Q9GZX5 532 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 UBQLN3Q9H347 655 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 ZMAT3Q9HA38 289 aaKnown RBP8.47□□□□□ -1.05
HPS4-208ENST00000464362 HHATLQ9HCP6 504 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 SEMA4GQ9NTN9 838 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 KLHL9Q9P2J3 617 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 SCP2D1Q9UJQ7 156 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 TRPM6Q9BX84 2022 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 TRIOBPQ9H2D6 2365 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 HYKKA2RU49 373 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 SLC9B1P1A6NJY1 282 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 RFXAPO00287 272 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 FZD7O75084 574 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 CD160O95971 181 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 HRGP04196 525 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 ZNF806P0C7X5 589 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 CPMP14384 443 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 GABRA5P31644 462 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 RPS27P42677 84 aaKnown RBP8.46□□□□□ -1.05
HPS4-208ENST00000464362 NR0B1P51843 470 aaKnown RBP8.46□□□□□ -1.05
HPS4-208ENST00000464362 LIM2P55344 173 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 PLCXD2Q0VAA5 305 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 ARHGAP19Q14CB8 494 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 RPE65Q16518 533 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 MEPCEQ7L2J0 689 aaKnown RBP8.46□□□□□ -1.05
HPS4-208ENST00000464362 COMMD7Q86VX2 200 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 SLC35F2Q8IXU6 374 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 ZNF619Q8N2I2 560 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 ARL14Q8N4G2 192 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 SLC7A6Q92536 515 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 ORAI3Q9BRQ5 295 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 PRRG4Q9BZD6 226 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 CD93Q9NPY3 652 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 PRSS16Q9NQE7 514 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 FBXO8Q9NRD0 319 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 DHDHQ9UQ10 334 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 UNC13CQ8NB66 2214 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 A0A0B4J203 849 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 TRBV5-4A0A0C4DH59 114 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 A0A1W2PR48 441 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 TMEM72A0PK05 275 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 H0YGG7 62 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 WRBO00258 174 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 PRICKLE3O43900 615 aaPredicted RBP8.46□□□□□ -1.05
HPS4-208ENST00000464362 TIMP1P01033 207 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 SFTPBP07988 381 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 THEGLP0DJG4 465 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 AKR1C4P17516 323 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 CCNOP22674 350 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 UGT2B10P36537 528 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 ARF3P61204 181 aaPredicted RBP8.46□□□□□ -1.05
HPS4-208ENST00000464362 ACTA2P62736 377 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 ACTG2P63267 376 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 INSL4Q14641 139 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 GRM7Q14831 915 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 IRAK1BP1Q5VVH5 260 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 NXNL2Q5VZ03 156 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 Q6ZSR6 202 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 BEST3Q8N1M1 668 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 OR5AK2Q8NH90 309 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 ZFPM2Q8WW38 1151 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 OPALINQ96PE5 141 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 OR14A2Q96R54 314 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 NMNAT3Q96T66 252 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 CHST8Q9H2A9 424 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 HINT3Q9NQE9 182 aaKnown RBP8.46□□□□□ -1.05
HPS4-208ENST00000464362 VDAC3Q9Y277 283 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 PCDHGB2Q9Y5G2 931 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 PIAS3Q9Y6X2 628 aa8.46□□□□□ -1.05
HPS4-208ENST00000464362 CDHR4A6H8M9 788 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 CENPBD1B2RD01 187 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 H3BQ06 376 aaPredicted RBP8.46□□□□□ -1.06
HPS4-208ENST00000464362 PEX12O00623 359 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 CTSLP07711 333 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 FRKP42685 505 aaPredicted RBP8.46□□□□□ -1.06
HPS4-208ENST00000464362 ARRB1P49407 418 aaPredicted RBP8.46□□□□□ -1.06
HPS4-208ENST00000464362 ALG10Q5BKT4 473 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 TMEM225Q6GV28 225 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 RPL13AP3Q6NVV1 102 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 OR4M1Q8NGD0 313 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 OR13C5Q8NGS8 318 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 GAL3ST3Q96A11 431 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 RBP7Q96R05 134 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 FAM83CQ9BQN1 747 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 KATNB1Q9BVA0 655 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 CDCP1Q9H5V8 836 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 SLC39A1Q9NY26 324 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 SLC6A14Q9UN76 642 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 PIKFYVEQ9Y2I7 2098 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 TEX13DA0A0J9YY54 714 aaPredicted RBP8.46□□□□□ -1.06
HPS4-208ENST00000464362 OR2W5A6NFC9 320 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 PPM1BO75688 479 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 VNN2O95498 520 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 HLA-DMAP28067 261 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 WNT3P56703 355 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 NKAPLQ5M9Q1 402 aa8.46□□□□□ -1.06
HPS4-208ENST00000464362 GLT8D1Q68CQ7 371 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms