RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 PAIP1Q9H074 479 aaKnown RBP13.8□□□□□ -0.2
VARS-219ENST00000461328 SLC38A1Q9H2H9 487 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 RNF122Q9H9V4 155 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 TIGARQ9NQ88 270 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 CALML5Q9NZT1 146 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 PCDHB14Q9Y5E9 798 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 PCNX3Q9H6A9 2034 aa13.8□□□□□ -0.2
VARS-219ENST00000461328 AGAP5A6NIR3 686 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 CLDN24A6NM45 220 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 TROVE2P10155 538 aaKnown RBP eCLIP13.79□□□□□ -0.2
VARS-219ENST00000461328 IL7RP16871 459 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 DNAJA1P31689 397 aaKnown RBP13.79□□□□□ -0.2
VARS-219ENST00000461328 PGM1P36871 562 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 KIR2DL2P43627 348 aaPredicted RBP13.79□□□□□ -0.2
VARS-219ENST00000461328 SLC6A8P48029 635 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 CTBP2P56545 445 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 CARD18P57730 90 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 MERTKQ12866 999 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 CTU2Q2VPK5 515 aaKnown RBP13.79□□□□□ -0.2
VARS-219ENST00000461328 C3orf33Q6P1S2 294 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 VWA1Q6PCB0 445 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 BTLAQ7Z6A9 289 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 FUNDC1Q8IVP5 155 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 CMIPQ8IY22 773 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 FAM71CQ8NEG0 241 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 STON2Q8WXE9 905 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 OSTF1Q92882 214 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 ZG16BQ96DA0 208 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 STARD4Q96DR4 205 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 ADGRG7Q96K78 797 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 MTHFD2LQ9H903 347 aaPredicted RBP13.79□□□□□ -0.2
VARS-219ENST00000461328 SERINC1Q9NRX5 453 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 THUMPD1Q9NXG2 353 aaKnown RBP13.79□□□□□ -0.2
VARS-219ENST00000461328 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.79□□□□□ -0.2
VARS-219ENST00000461328 CLEC4AQ9UMR7 237 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 EMC9Q9Y3B6 208 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 MED12LQ86YW9 2145 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 CCDC168Q8NDH2 2452 aa13.79□□□□□ -0.2
VARS-219ENST00000461328 FAM221AA4D161 298 aa13.78□□□□□ -0.2
VARS-219ENST00000461328 SH3D21A4FU49 640 aa13.78□□□□□ -0.2
VARS-219ENST00000461328 C5orf58C9J3I9 102 aa13.78□□□□□ -0.2
VARS-219ENST00000461328 CLIC1O00299 241 aa13.78□□□□□ -0.2
VARS-219ENST00000461328 ADAMDEC1O15204 470 aa13.78□□□□□ -0.2
VARS-219ENST00000461328 BCAS1O75363 584 aaPredicted RBP13.78□□□□□ -0.2
VARS-219ENST00000461328 DBIP07108 87 aaKnown RBP13.78□□□□□ -0.2
VARS-219ENST00000461328 VIMP08670 466 aaKnown RBP13.78□□□□□ -0.2
VARS-219ENST00000461328 UQCRBP14927 111 aa13.78□□□□□ -0.2
VARS-219ENST00000461328 KCNJ5P48544 419 aa13.78□□□□□ -0.2
VARS-219ENST00000461328 MVDP53602 400 aa13.78□□□□□ -0.2
VARS-219ENST00000461328 SESN3P58005 492 aa13.78□□□□□ -0.2
VARS-219ENST00000461328 FADDQ13158 208 aa13.78□□□□□ -0.2
VARS-219ENST00000461328 LIN52Q52LA3 116 aa13.78□□□□□ -0.2
VARS-219ENST00000461328 RPS26P11Q5JNZ5 115 aaPredicted RBP13.78□□□□□ -0.2
VARS-219ENST00000461328 CPNE4Q96A23 557 aaPredicted RBP13.78□□□□□ -0.2
VARS-219ENST00000461328 TMEM19Q96HH6 336 aa13.78□□□□□ -0.2
VARS-219ENST00000461328 OPN3Q9H1Y3 402 aaPredicted RBP13.78□□□□□ -0.2
VARS-219ENST00000461328 EXOSC3Q9NQT5 275 aaKnown RBP13.78□□□□□ -0.2
VARS-219ENST00000461328 TMEM45AQ9NWC5 275 aa13.78□□□□□ -0.2
VARS-219ENST00000461328 NDRG3Q9UGV2 375 aa13.78□□□□□ -0.2
VARS-219ENST00000461328 PROCRQ9UNN8 238 aa13.78□□□□□ -0.2
VARS-219ENST00000461328 SPIN1Q9Y657 262 aaPredicted RBP13.78□□□□□ -0.2
VARS-219ENST00000461328 CASKO14936 926 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 ANGPT2O15123 496 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 NTN1O95631 604 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 PABPC4LP0CB38 370 aaKnown RBP13.77□□□□□ -0.21
VARS-219ENST00000461328 TFPIP10646 304 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 NID1P14543 1247 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 PPIBP23284 216 aaKnown RBP13.77□□□□□ -0.21
VARS-219ENST00000461328 SF3A3Q12874 501 aaKnown RBP eCLIP13.77□□□□□ -0.215e-7■■■■■ 29.3
VARS-219ENST00000461328 RGNQ15493 299 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 SLC25A53Q5H9E4 307 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 PAGE3Q5JUK9 113 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 MRPL2Q5T653 305 aaKnown RBP13.77□□□□□ -0.21
VARS-219ENST00000461328 PLEKHM3Q6ZWE6 761 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 FAM214BQ7L5A3 538 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 CDC20BQ86Y33 519 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 OR52P1PQ8NH57 321 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 SLC38A5Q8WUX1 472 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 ROBO4Q8WZ75 1007 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 CNOT9Q92600 299 aaKnown RBP13.77□□□□□ -0.21
VARS-219ENST00000461328 ZNF524Q96C55 264 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 GMPPAQ96IJ6 420 aaPredicted RBP13.77□□□□□ -0.21
VARS-219ENST00000461328 DACH2Q96NX9 599 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 OR5B2Q96R09 309 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 SLC39A3Q9BRY0 314 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 TMEM120AQ9BXJ8 343 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 MED4Q9NPJ6 270 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 ACER3Q9NUN7 267 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 FGFR1OP2Q9NVK5 253 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 LEF1Q9UJU2 399 aaPredicted RBP13.77□□□□□ -0.21
VARS-219ENST00000461328 EDARQ9UNE0 448 aa13.77□□□□□ -0.21
VARS-219ENST00000461328 A0A1W2PNR3 127 aa13.76□□□□□ -0.21
VARS-219ENST00000461328 EFNA2O43921 213 aa13.76□□□□□ -0.21
VARS-219ENST00000461328 GOSR1O95249 250 aa13.76□□□□□ -0.21
VARS-219ENST00000461328 RPS4Y1P22090 263 aaKnown RBP13.76□□□□□ -0.21
VARS-219ENST00000461328 CD79BP40259 229 aa13.76□□□□□ -0.21
VARS-219ENST00000461328 IDH2P48735 452 aaKnown RBP13.76□□□□□ -0.21
VARS-219ENST00000461328 ART1P52961 327 aa13.76□□□□□ -0.21
VARS-219ENST00000461328 IST1P53990 364 aa13.76□□□□□ -0.21
VARS-219ENST00000461328 GUCY1A3Q02108 690 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms