RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 FBXO15Q8NCQ5 510 aaPredicted RBP4.2□□□□□ -1.74
DEPDC1-202ENST00000456315 GOT1L1Q8NHS2 421 aaPredicted RBP4.2□□□□□ -1.74
DEPDC1-202ENST00000456315 C9orf43Q8TAL5 461 aaPredicted RBP4.2□□□□□ -1.74
DEPDC1-202ENST00000456315 LINC01599Q8WXQ3 324 aa4.2□□□□□ -1.74
DEPDC1-202ENST00000456315 ZNF559Q9BR84 538 aa4.2□□□□□ -1.74
DEPDC1-202ENST00000456315 SOX7Q9BT81 388 aa4.2□□□□□ -1.74
DEPDC1-202ENST00000456315 NLNQ9BYT8 704 aa4.2□□□□□ -1.74
DEPDC1-202ENST00000456315 ZMAT3Q9HA38 289 aaKnown RBP4.2□□□□□ -1.74
DEPDC1-202ENST00000456315 HRASLSQ9HDD0 168 aa4.2□□□□□ -1.74
DEPDC1-202ENST00000456315 ARL15Q9NXU5 204 aa4.2□□□□□ -1.74
DEPDC1-202ENST00000456315 MYO9AB2RTY4 2548 aa4.2□□□□□ -1.74
DEPDC1-202ENST00000456315 TRBV5-4A0A0C4DH59 114 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 A0A1B0GVI7 797 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ARL5CA6NH57 179 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 METTL12A8MUP2 240 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 SGCEO43556 437 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 RGS14O43566 566 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 TMPRSS11DO60235 418 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 TRIM3O75382 744 aaPredicted RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 CLDN9O95484 217 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 IGLV3-27P01718 113 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 FURINP09958 794 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 HOXB1P14653 301 aaPredicted RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 RHOQP17081 205 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 CSF2RBP32927 897 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 GJA4P35212 333 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 OAZ1P54368 228 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 CSNK2BP67870 215 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 BEX3Q00994 111 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 LRRC74AQ0VAA2 488 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ATXN7L3Q14CW9 347 aaPredicted RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ELAVL1Q15717 326 aaKnown RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 MAPK14Q16539 360 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 MICBQ29980 383 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 RTP2Q5QGT7 225 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 LIN54Q6MZP7 749 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ARL9Q6T311 187 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 BTN2A1Q7KYR7 527 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 MAMDC2Q7Z304 686 aaPredicted RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 C2orf73Q8N5S3 287 aaPredicted RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 KIAA1143Q96AT1 154 aaPredicted RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 CLCC1Q96S66 551 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 YIPF4Q9BSR8 244 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 RDH14Q9HBH5 336 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 FGF20Q9NP95 211 aaPredicted RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 POT1Q9NUX5 634 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 FBXO34Q9NWN3 711 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 VPS29Q9UBQ0 182 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 SCP2D1Q9UJQ7 156 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ACSL5Q9ULC5 683 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 MYADML2A6NDP7 307 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 HMGN4O00479 90 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 KLF4O43474 513 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 DNAJB6O75190 326 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ANOS1P23352 680 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 RPL3P39023 403 aaKnown RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 RFC3P40938 356 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 PDX1P52945 283 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 DMWDQ09019 674 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 SPEM2Q0P670 501 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 TAF10Q12962 218 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 OCLNQ16625 522 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 FNDC3BQ53EP0 1204 aaKnown RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 JMJD6Q6NYC1 403 aaPredicted RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 C1orf94Q6P1W5 598 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 TMEM71Q6P5X7 295 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 FRRS1Q6ZNA5 592 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 RTN4RL1Q86UN2 441 aaPredicted RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 SCN4BQ8IWT1 228 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 FAM98AQ8NCA5 519 aaKnown RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 OR5J2Q8NH18 312 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 GHSRQ92847 366 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 PPP1R14AQ96A00 147 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 RFT1Q96AA3 541 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 NXPE2Q96DL1 559 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 PELI1Q96FA3 418 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 C16orf58Q96GQ5 468 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 F2RL3Q96RI0 385 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 SLC35A5Q9BS91 424 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ZYG11BQ9C0D3 744 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 SLC32A1Q9H598 525 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 MEPEQ9NQ76 525 aaPredicted RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ACTR10Q9NZ32 417 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 FCF1Q9Y324 198 aaKnown RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ACOD1A6NK06 481 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 GLOD5A6NK44 160 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 KRBOX1C9JBD0 128 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 CCSO14618 274 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 RAD1O60671 282 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 IGHA1P01876 353 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 BCHEP06276 602 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 ANXA4P09525 319 aaPredicted RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 COX7A2P14406 83 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 PSMB1P20618 241 aaKnown RBP4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 CD9P21926 228 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 IMPA1P29218 277 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 RFX3P48380 749 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 AP1S2P56377 157 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 CBFBQ13951 182 aa4.19□□□□□ -1.74
DEPDC1-202ENST00000456315 HEPACAMQ14CZ8 416 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms