RNA–Protein interactions for RNA: ENST00000447933.5

LINC01006-206, Transcript of long intergenic non-protein coding RNA 1006, human

TSL 3

Gene LINC01006, Length 766 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01006-206	ENST00000447933	TPT1P8	Q9HAU6	139 aa		13.46	□□□□□ -0.25
LINC01006-206	ENST00000447933	EXOSC3	Q9NQT5	275 aa	Known RBP	13.46	□□□□□ -0.25
LINC01006-206	ENST00000447933	PLSCR4	Q9NRQ2	329 aa		13.46	□□□□□ -0.25
LINC01006-206	ENST00000447933	ACER3	Q9NUN7	267 aa		13.46	□□□□□ -0.25
LINC01006-206	ENST00000447933	ELOVL5	Q9NYP7	299 aa		13.46	□□□□□ -0.25
LINC01006-206	ENST00000447933	PROCR	Q9UNN8	238 aa		13.46	□□□□□ -0.25
LINC01006-206	ENST00000447933	EMC9	Q9Y3B6	208 aa		13.46	□□□□□ -0.25
LINC01006-206	ENST00000447933	SASH3	O75995	380 aa		13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	GOSR1	O95249	250 aa		13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	NR2F1	P10589	423 aa		13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	CPOX	P36551	454 aa		13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	STX1B	P61266	288 aa		13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	MAPK11	Q15759	364 aa		13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	ZNF239	Q16600	458 aa	Known RBP	13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	PPP4R4	Q6NUP7	873 aa		13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	FUNDC1	Q8IVP5	155 aa		13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	CMIP	Q8IY22	773 aa		13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	ZNF610	Q8N9Z0	462 aa		13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	STON2	Q8WXE9	905 aa		13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	ROBO4	Q8WZ75	1007 aa		13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	GTF2H4	Q92759	462 aa		13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	CPNE4	Q96A23	557 aa	Predicted RBP	13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	POLDIP3	Q9BY77	421 aa	Known RBP	13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	SRXN1	Q9BYN0	137 aa		13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	QRSL1	Q9H0R6	528 aa	Known RBP	13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	COQ10B	Q9H8M1	238 aa		13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	TMEM45A	Q9NWC5	275 aa		13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	NDRG3	Q9UGV2	375 aa		13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	CLEC4A	Q9UMR7	237 aa		13.45	□□□□□ -0.26
LINC01006-206	ENST00000447933	SH3D21	A4FU49	640 aa		13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	CLDN24	A6NM45	220 aa		13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	ANP32D	O95626	131 aa		13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	PLG	P00747	810 aa	Predicted RBP	13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	TFPT	P0C1Z6	253 aa		13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	RPS4Y1	P22090	263 aa	Known RBP	13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	CTBP2	P56545	445 aa		13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	RAC3	P60763	192 aa		13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	IRX1	P78414	480 aa	Predicted RBP	13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	PLAUR	Q03405	335 aa		13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	GTDC1	Q4AE62	458 aa		13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	C6orf10	Q5SRN2	563 aa		13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	BLOC1S3	Q6QNY0	202 aa		13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	PLEKHM3	Q6ZWE6	761 aa		13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	HMGN2P46	Q86SG4	172 aa		13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	ATP6V1C2	Q8NEY4	427 aa		13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	RNF128	Q8TEB7	428 aa		13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	PAIP1	Q9H074	479 aa	Known RBP	13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	GP6	Q9HCN6	339 aa		13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	SERINC1	Q9NRX5	453 aa		13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933	TESMIN	Q9Y4I5	508 aa		13.44	□□□□□ -0.26
LINC01006-206	ENST00000447933		A0A096LPI6	279 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	C16orf97	H3BN30	126 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	DBI	P07108	87 aa	Known RBP	13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	ETFA	P13804	333 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	POU2F1	P14859	743 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	HOXB9	P17482	250 aa	Predicted RBP	13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	SLC7A1	P30825	629 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	DNAJA1	P31689	397 aa	Known RBP	13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	UGT2B10	P36537	528 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	APOBEC1	P41238	236 aa	Known RBP	13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	CRAT	P43155	626 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	ATP4B	P51164	291 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	MERTK	Q12866	999 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	GNA13	Q14344	377 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	RNPS1	Q15287	305 aa	Known RBP	13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	TESK1	Q15569	626 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	C3orf33	Q6P1S2	294 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	SLC2A7	Q6PXP3	512 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	CDC20B	Q86Y33	519 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	ARFGAP2	Q8N6H7	521 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	ZNF563	Q8TA94	476 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	SLC38A5	Q8WUX1	472 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	CNOT9	Q92600	299 aa	Known RBP	13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	NRGN	Q92686	78 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	AURKB	Q96GD4	344 aa	Predicted RBP	13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	REXO5	Q96IC2	774 aa	Known RBP	13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	CCDC106	Q9BWC9	280 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	SLC52A3	Q9NQ40	469 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	THUMPD1	Q9NXG2	353 aa	Known RBP	13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	CALML5	Q9NZT1	146 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	P2RX2	Q9UBL9	471 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	ITGB1BP2	Q9UKP3	347 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	PCDHB14	Q9Y5E9	798 aa		13.43	□□□□□ -0.26
LINC01006-206	ENST00000447933	DSPP	Q9NZW4	1301 aa		13.42	□□□□□ -0.26
LINC01006-206	ENST00000447933	TEP1	Q99973	2627 aa	Known RBP	13.42	□□□□□ -0.26
LINC01006-206	ENST00000447933	CASK	O14936	926 aa		13.42	□□□□□ -0.26
LINC01006-206	ENST00000447933	ADAM11	O75078	769 aa		13.42	□□□□□ -0.26
LINC01006-206	ENST00000447933	PRKD3	O94806	890 aa		13.42	□□□□□ -0.26
LINC01006-206	ENST00000447933	HRG	P04196	525 aa		13.42	□□□□□ -0.26
LINC01006-206	ENST00000447933	IL7R	P16871	459 aa		13.42	□□□□□ -0.26
LINC01006-206	ENST00000447933	ENPP1	P22413	925 aa		13.42	□□□□□ -0.26
LINC01006-206	ENST00000447933	FKBP2	P26885	142 aa	Known RBP	13.42	□□□□□ -0.26
LINC01006-206	ENST00000447933	RYK	P34925	604 aa		13.42	□□□□□ -0.26
LINC01006-206	ENST00000447933	KCNJ5	P48544	419 aa		13.42	□□□□□ -0.26
LINC01006-206	ENST00000447933	DSTN	P60981	165 aa		13.42	□□□□□ -0.26
LINC01006-206	ENST00000447933	LRIF1	Q5T3J3	769 aa		13.42	□□□□□ -0.26
LINC01006-206	ENST00000447933	TMPPE	Q6ZT21	453 aa		13.42	□□□□□ -0.26
LINC01006-206	ENST00000447933	FCRLA	Q7L513	359 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms