RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 B4GALT7Q9UBV7 327 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF282Q9UDV7 671 aaPredicted RBP4.35□□□□□ -1.71
PTPN4-206ENST00000441089 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.35□□□□□ -1.71
PTPN4-206ENST00000441089 PRPF19Q9UMS4 504 aaKnown RBP4.35□□□□□ -1.71
PTPN4-206ENST00000441089 RRP15Q9Y3B9 282 aaKnown RBP4.35□□□□□ -1.71
PTPN4-206ENST00000441089 TNFRSF18Q9Y5U5 241 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 GMEB1Q9Y692 573 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 ALPK2Q86TB3 2170 aa4.35□□□□□ -1.71
PTPN4-206ENST00000441089 KMT2CQ8NEZ4 4911 aaKnown RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 C15orf38-AP3S2A0A0A6YYH1 394 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 TCRBV16S1A1N1A0A5B0 115 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 CLCA1A8K7I4 914 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 A8MV72 311 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 FAM220BPB1ANY3 271 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 CLIC1O00299 241 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 SYT5O00445 386 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 PLOD2O00469 737 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 CD5LO43866 347 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 GCM2O75603 506 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 PSMG1O95456 288 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 ANP32DO95626 131 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 ATP1B1P05026 303 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 SLC35E2P0CK97 266 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 ETFAP13804 333 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 HSD17B1P14061 328 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 NCK1P16333 377 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 PORP16435 677 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 TCN1P20061 433 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 ATP6V1B2P21281 511 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 S1PR1P21453 382 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 FPR1P21462 350 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 NT5EP21589 574 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 ME2P23368 584 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 TLX1P31314 330 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 UQCRC1P31930 480 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 STT3AP46977 705 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 CCT3P49368 545 aaKnown RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 MAN2A2P49641 1150 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 SELENOPP49908 381 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 ERFP50548 548 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 CRYBA2P53672 197 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 HSD17B7P56937 341 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 NUP107P57740 925 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 EEFSECP57772 596 aaKnown RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 SKP1P63208 163 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 ELF3P78545 371 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 HSF1Q00613 529 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 DEFA6Q01524 100 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 EEF1A2Q05639 463 aaKnown RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 LRRC74AQ0VAA2 488 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 FUT5Q11128 374 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 CCNIQ14094 377 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 KPNB1Q14974 876 aaKnown RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 RGNQ15493 299 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 MAPK11Q15759 364 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 HYAL4Q2M3T9 481 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 MINDY4Q4G0A6 757 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 SAMD4BQ5PRF9 694 aaKnown RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 LIPNQ5VXI9 398 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 ARHGAP11AQ6P4F7 1023 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 TNFAIP8L2Q6P589 184 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 C12orf54Q6X4T0 127 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 TMEM64Q6YI46 380 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 QSOX2Q6ZRP7 698 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 LANCL3Q6ZV70 420 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 OLIG3Q7RTU3 272 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 C6orf120Q7Z4R8 191 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 WDR53Q7Z5U6 358 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 NET1Q7Z628 596 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 FGD2Q7Z6J4 655 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 ARPINQ7Z6K5 226 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 IFNEQ86WN2 208 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 RNF130Q86XS8 419 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 KIF18BQ86Y91 864 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 OR2L13Q8N349 312 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF321PQ8N8H1 164 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 PLPP5Q8NEB5 264 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 VPS37AQ8NEZ2 397 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 OR52R1Q8NGF1 315 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 OR52N2Q8NGI0 321 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 ZFP28Q8NHY6 868 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 FAM110BQ8TC76 370 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 Q8TCH9 128 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 STT3BQ8TCJ2 826 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF675Q8TD23 568 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 PTPMT1Q8WUK0 201 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 MCUR1Q96AQ8 359 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 CCDC124Q96CT7 223 aaKnown RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 NEURL3Q96EH8 262 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 GIMAP5Q96F15 307 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 OTUB1Q96FW1 271 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 PERPQ96FX8 193 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 C16orf58Q96GQ5 468 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 CRB3Q9BUF7 120 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 THUMPD3Q9BV44 507 aaKnown RBP4.34□□□□□ -1.71
PTPN4-206ENST00000441089 SPATA9Q9BWV2 254 aa4.34□□□□□ -1.71
PTPN4-206ENST00000441089 RSPO3Q9BXY4 272 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms