RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 KNL1Q8NG31 2342 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 A0A087WV62 115 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 CYR61O00622 381 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 BRINP1O60477 761 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 ADAM11O75078 769 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 GPR75O95800 540 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 ERP29P30040 261 aaKnown RBP10.91□□□□□ -0.66
CD44-209ENST00000433892 TNFRSF4P43489 277 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 LSSP48449 732 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 GZMKP49863 264 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 HCCSP53701 268 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 KIAA1024LP59773 190 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 RRAS2P62070 204 aaPredicted RBP10.91□□□□□ -0.66
CD44-209ENST00000433892 ZNF85Q03923 595 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 SLC25A35Q3KQZ1 300 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 TIGD3Q6B0B8 471 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 SDE2Q6IQ49 451 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 RPL13AP3Q6NVV1 102 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 SSX6Q7RTT6 188 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 OAFQ86UD1 273 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 OR13C5Q8NGS8 318 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 OR5J2Q8NH18 312 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 SMPDL3BQ92485 455 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 PEX11GQ96HA9 241 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 STACQ99469 402 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 ERVMER34-1Q9H9K5 563 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 SLC28A3Q9HAS3 691 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 TMEM27Q9HBJ8 222 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 LYRM4Q9HD34 91 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 ACOXLQ9NUZ1 547 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 EVA1BQ9NVM1 165 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 ING3Q9NXR8 418 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 FLRT3Q9NZU0 649 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 PCOLCE2Q9UKZ9 415 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 SPEGQ15772 3267 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 A0A1W2PPK0 400 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 A6NCN8 305 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 MAGEB4O15481 346 aaPredicted RBP10.91□□□□□ -0.66
CD44-209ENST00000433892 EEF1E1O43324 174 aaKnown RBP10.91□□□□□ -0.66
CD44-209ENST00000433892 FMO6PO60774 539 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 PTP4A3O75365 173 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 NGFRP08138 427 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 PYCR1P32322 319 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 EVI2BP34910 448 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 PITPNBP48739 271 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 POU6F2P78424 691 aaPredicted RBP10.91□□□□□ -0.66
CD44-209ENST00000433892 MGAT2Q10469 447 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 FBXO46Q6PJ61 603 aaPredicted RBP10.91□□□□□ -0.66
CD44-209ENST00000433892 SFTPA2Q8IWL1 248 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 GPALPP1Q8IXQ4 340 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 GPR135Q8IZ08 494 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 SLC44A3Q8N4M1 653 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 RFLNBQ8N5W9 214 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 DNAJC5GQ8N7S2 189 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 ZFAND1Q8TCF1 268 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 RFT1Q96AA3 541 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 SIPA1Q96FS4 1042 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 PGLYRP3Q96LB9 341 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 ABHD1Q96SE0 405 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 TMEM106CQ9BVX2 250 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 ABCG5Q9H222 651 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 SYNDIG1Q9H7V2 258 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 INPP5EQ9NRR6 644 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 CLEC4AQ9UMR7 237 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 TMEM5Q9Y2B1 443 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 SPACA6W5XKT8 324 aa10.91□□□□□ -0.66
CD44-209ENST00000433892 A0A0G2JK05 382 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 A0A1B0GWA3 101 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 A0A1W2PRG6 482 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 SLC9B1P1A6NJY1 282 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 LINC01565O15544 149 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 TRIM3O75382 744 aaPredicted RBP10.9□□□□□ -0.66
CD44-209ENST00000433892 KLF8O95600 359 aaPredicted RBP10.9□□□□□ -0.66
CD44-209ENST00000433892 ZNF3P17036 446 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 SLC2A5P22732 501 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 SLC6A1P30531 599 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 ACSL1P33121 698 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 ATP12AP54707 1039 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 SNRPD2P62316 118 aaKnown RBP10.9□□□□□ -0.66
CD44-209ENST00000433892 GALK2Q01415 458 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 TFF2Q03403 129 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 ACSM3Q53FZ2 586 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 FAAH2Q6GMR7 532 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 ANKRD54Q6NXT1 300 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 ZNF613Q6PF04 617 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 DGAT2L6Q6ZPD8 337 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 KRT74Q7RTS7 529 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 C7orf61Q8IZ16 206 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 ARL14Q8N4G2 192 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 ZNF784Q8NCA9 323 aaPredicted RBP10.9□□□□□ -0.66
CD44-209ENST00000433892 TRMT10AQ8TBZ6 339 aaKnown RBP10.9□□□□□ -0.66
CD44-209ENST00000433892 GHSRQ92847 366 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 TRIM63Q969Q1 353 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 CREB3L1Q96BA8 519 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 KCTD12Q96CX2 325 aaKnown RBP10.9□□□□□ -0.66
CD44-209ENST00000433892 GABRG3Q99928 467 aa10.9□□□□□ -0.66
CD44-209ENST00000433892 A0A0B4J2E0 115 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 A0A1B0GX12 115 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 GNB5O14775 395 aa10.89□□□□□ -0.67
CD44-209ENST00000433892 AKR7A2O43488 359 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms