RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 CENPVL1A0A0U1RR11 272 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 PRSS38A1L453 326 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 ZC3H12DA2A288 527 aaKnown RBP10.46□□□□□ -0.74
USP4-205ENST00000431357 C7orf66A4D0T2 115 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 DVL2O14641 736 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 PTP4A3O75365 173 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 REM1O75628 298 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 ATP1B1P05026 303 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 GKN3PP0CG01 181 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 PEPDP12955 493 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 SLC2A5P22732 501 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 HTR2BP41595 481 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 KIAA1024LP59773 190 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 DEFB134Q4QY38 66 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 TRMT12Q53H54 448 aaKnown RBP10.46□□□□□ -0.74
USP4-205ENST00000431357 DMKNQ6E0U4 476 aaPredicted RBP10.46□□□□□ -0.74
USP4-205ENST00000431357 OR4N5Q8IXE1 308 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 GPR135Q8IZ08 494 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 FAM109AQ8N4B1 249 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 LRRC17Q8N6Y2 441 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 OR10Z1Q8NGY1 313 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 ZCCHC10Q8TBK6 192 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 TRMT10AQ8TBZ6 339 aaKnown RBP10.46□□□□□ -0.74
USP4-205ENST00000431357 ZFPM2Q8WW38 1151 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 SMPDL3BQ92485 455 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 GFM1Q96RP9 751 aaKnown RBP10.46□□□□□ -0.74
USP4-205ENST00000431357 C7orf50Q9BRJ6 194 aaKnown RBP10.46□□□□□ -0.74
USP4-205ENST00000431357 HCAR1Q9BXC0 346 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 MFRPQ9BY79 579 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 ENKD1Q9H0I2 346 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 MED28Q9H204 178 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 OR51V1Q9H2C8 321 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 LIN7BQ9HAP6 207 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 ADGRL4Q9HBW9 690 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 FGF22Q9HCT0 170 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 C20orf141Q9NUB4 165 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 PTTG3PQ9NZH4 202 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 COPZ2Q9P299 210 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 TBC1D29Q9UFV1 150 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 PCOLCE2Q9UKZ9 415 aa10.46□□□□□ -0.74
USP4-205ENST00000431357 A0A0G2JK05 382 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 J3QLW9 94 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 FZD7O75084 574 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 PAHP00439 452 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 SAGP10523 405 aaPredicted RBP10.45□□□□□ -0.74
USP4-205ENST00000431357 ZNF19P17023 458 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 RAB3BP20337 219 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 SLC6A6P31641 620 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 RBM34P42696 430 aaKnown RBP10.45□□□□□ -0.74
USP4-205ENST00000431357 SLC16A1P53985 500 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 POU6F2P78424 691 aaPredicted RBP10.45□□□□□ -0.74
USP4-205ENST00000431357 ZNF85Q03923 595 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 SLC3A1Q07837 685 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 NTRK2Q16620 822 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 ACSM3Q53FZ2 586 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 ARHGAP11AQ6P4F7 1023 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 RTL4Q6ZR62 310 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 ASB18Q6ZVZ8 466 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 OR13C2Q8NGS9 318 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 C4orf36Q96KX1 117 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 TWSG1Q9GZX9 223 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 RANBP3Q9H6Z4 567 aaPredicted RBP10.45□□□□□ -0.74
USP4-205ENST00000431357 ERVMER34-1Q9H9K5 563 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 EMC7Q9NPA0 242 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 ZNF624Q9P2J8 865 aaPredicted RBP10.45□□□□□ -0.74
USP4-205ENST00000431357 ZMIZ1Q9ULJ6 1067 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 ANKRD61A6NGH8 418 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 SLC9B1P1A6NJY1 282 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 OR5K4A6NMS3 321 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 E9PI62 339 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 EEF1E1O43324 174 aaKnown RBP10.45□□□□□ -0.74
USP4-205ENST00000431357 CHP2O43745 196 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 LANCL1O43813 399 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 UBL3O95164 117 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 CD1AP06126 327 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 GUSBP08236 651 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 FUT1P19526 365 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 NT5EP21589 574 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 DRD5P21918 477 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 STOMP27105 288 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 MAP3K8P41279 467 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 RAG2P55895 527 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 E2F1Q01094 437 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 LAMTOR1Q6IAA8 161 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 THSD4Q6ZMP0 1018 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 ZNF782Q6ZMW2 699 aaPredicted RBP10.45□□□□□ -0.74
USP4-205ENST00000431357 CADM2Q8N3J6 435 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 FLVCR1-AS1Q8TAF5 88 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 HERVK_113Q902F9 699 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 RSC1A1Q92681 617 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 SNAPC3Q92966 411 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 ARMC5Q96C12 935 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 SCMH1Q96GD3 660 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 PGLYRP3Q96LB9 341 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 CMTM3Q96MX0 182 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 OR2M2Q96R28 347 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 PPIL3Q9H2H8 161 aaKnown RBP10.45□□□□□ -0.74
USP4-205ENST00000431357 ZCCHC4Q9H5U6 513 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 KCNE5Q9UJ90 142 aa10.45□□□□□ -0.74
USP4-205ENST00000431357 HSPB11Q9Y547 144 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms