RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 CDK20Q8IZL9 346 aa12.32□□□□□ -0.44
SNRNP200-202ENST00000429650 OR4N4Q8N0Y3 316 aa12.32□□□□□ -0.44
SNRNP200-202ENST00000429650 TMEM52Q8NDY8 209 aa12.32□□□□□ -0.44
SNRNP200-202ENST00000429650 GRPEL2Q8TAA5 225 aa12.32□□□□□ -0.44
SNRNP200-202ENST00000429650 TRIM63Q969Q1 353 aa12.32□□□□□ -0.44
SNRNP200-202ENST00000429650 CREB3L1Q96BA8 519 aa12.32□□□□□ -0.44
SNRNP200-202ENST00000429650 GFM1Q96RP9 751 aaKnown RBP12.32□□□□□ -0.44
SNRNP200-202ENST00000429650 STACQ99469 402 aa12.32□□□□□ -0.44
SNRNP200-202ENST00000429650 GON7Q9BXV9 100 aa12.32□□□□□ -0.44
SNRNP200-202ENST00000429650 MEPEQ9NQ76 525 aaPredicted RBP12.32□□□□□ -0.44
SNRNP200-202ENST00000429650 PILRAQ9UKJ1 303 aa12.32□□□□□ -0.44
SNRNP200-202ENST00000429650 CA5BQ9Y2D0 317 aa12.32□□□□□ -0.44
SNRNP200-202ENST00000429650 SLC35A3Q9Y2D2 325 aa12.32□□□□□ -0.44
SNRNP200-202ENST00000429650 MED31Q9Y3C7 131 aa12.32□□□□□ -0.44
SNRNP200-202ENST00000429650 TRAV27A0A087WT01 109 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 H0Y8X5 98 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 RFPL3O75679 317 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 ZNF10P21506 573 aaPredicted RBP12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 NT5EP21589 574 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 SLC2A5P22732 501 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 RBMS1P29558 406 aaKnown RBP12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 TALDO1P37837 337 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 ACTR1BP42025 376 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 RFX3P48380 749 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 ATP12AP54707 1039 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 ACTR1AP61163 376 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 GALK2Q01415 458 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 SLC3A1Q07837 685 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 TNK1Q13470 666 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 TMEM196Q5HYL7 178 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 FIGLAQ6QHK4 219 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 ABHD13Q7L211 337 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 OAFQ86UD1 273 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 GPALPP1Q8IXQ4 340 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 SAMD12Q8N8I0 201 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 DTX3Q8N9I9 347 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 CAMKVQ8NCB2 501 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 C7orf57Q8NEG2 295 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 C17orf47Q8NEP4 570 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 TSACCQ96A04 125 aaPredicted RBP12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 C4orf36Q96KX1 117 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 UQCC2Q9BRT2 126 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 TWSG1Q9GZX9 223 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 ADGRL4Q9HBW9 690 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 GALNT9Q9HCQ5 603 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 LYRM4Q9HD34 91 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 ING3Q9NXR8 418 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 PCOLCE2Q9UKZ9 415 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 ARHGEF17Q96PE2 2063 aaPredicted RBP12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 A0A0G2JK05 382 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 CPNE3O75131 537 aaKnown RBP12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 POLR2CP19387 275 aaPredicted RBP12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 SLC6A1P30531 599 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 ZNF85Q03923 595 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 CRMP1Q14194 572 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 EXOSC7Q15024 291 aaKnown RBP12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 TRAM1Q15629 374 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 ASB18Q6ZVZ8 466 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 CEACAM19Q7Z692 300 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 OR51A7Q8NH64 312 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 OR10G6Q8NH81 332 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 ABHD4Q8TB40 342 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 SMAP2Q8WU79 429 aaPredicted RBP12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 RFT1Q96AA3 541 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 THAP7Q9BT49 309 aaPredicted RBP12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 SLC28A3Q9HAS3 691 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 FBXL4Q9UKA2 621 aa12.31□□□□□ -0.44
SNRNP200-202ENST00000429650 A0A1B0GVC2 190 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 GXYLT2A0PJZ3 443 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 A6NIN4 97 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 RIIAD1A6NNX1 92 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 J3QLW9 94 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 BRINP1O60477 761 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 PTP4A3O75365 173 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 SC5DO75845 299 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 ALX3O95076 343 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 HOXC4P09017 264 aaPredicted RBP12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 ZNF19P17023 458 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 PRKCAP17252 672 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 NPR2P20594 1047 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 MAP3K8P41279 467 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 RAB25P57735 213 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 OR12D2P58182 307 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 TAS2R43P59537 309 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 NFATC4Q14934 902 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 PRICKLE4Q2TBC4 344 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 FAM109BQ6ICB4 259 aaPredicted RBP12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 RPTNQ6XPR3 784 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 PXKQ7Z7A4 578 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 ZAR1Q86SH2 424 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 TPRA1Q86W33 373 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 PLCZ1Q86YW0 608 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 CYB561A3Q8NBI2 242 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 GRHL3Q8TE85 626 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 PGLYRP3Q96LB9 341 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 TRAF4Q9BUZ4 470 aaPredicted RBP12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 TMEM168Q9H0V1 697 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 IL21RQ9HBE5 538 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 ACTR10Q9NZ32 417 aa12.3□□□□□ -0.44
SNRNP200-202ENST00000429650 MAT2BQ9NZL9 334 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms