RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 ZNF106Q9H2Y7 1883 aaKnown RBP3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 IGHV1OR21-1A0A087WYE8 117 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 A0A0D9SEW6 157 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 C21orf140B9A014 251 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 GOLGA8KD6RF30 607 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 GOLGA8RI6L899 631 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 M0QYV0 167 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 ADAMDEC1O15204 470 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 POLR2DO15514 142 aaKnown RBP3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 MED7O43513 233 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 DOK2O60496 412 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 PLOD3O60568 738 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 GSRP00390 522 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 FGF1P05230 155 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 S100A9P06702 114 aaKnown RBP3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 ALOX5P09917 674 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 SMIM18P0DKX4 95 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 SLC2A2P11168 524 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 CCNB1P14635 433 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 HPGDP15428 266 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 CAPN3P20807 821 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 CFL1P23528 166 aaKnown RBP3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 PTPN3P26045 913 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 CTNNA2P26232 953 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 HMOX2P30519 316 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 GCH1P30793 250 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 CASP14P31944 242 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 SERPINB6P35237 376 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 PTGER4P35408 488 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 TMED10P49755 219 aaKnown RBP3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 TMEM50BP56557 158 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 KIAA1024LP59773 190 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 STK4Q13043 487 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 PRKG2Q13237 762 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 COTL1Q14019 142 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 CASP8Q14790 479 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 IRF4Q15306 451 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 CHRNA6Q15825 494 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 BCL2A1Q16548 175 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 WSCD2Q2TBF2 565 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 MOGAT2Q3SYC2 334 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 TMEM52BQ4KMG9 183 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 BRMS1LQ5PSV4 323 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 PLBD1Q6P4A8 553 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 WDR74Q6RFH5 385 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 TMEM270Q6UE05 265 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 SPNS3Q6ZMD2 512 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 AKAP14Q86UN6 197 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 SLC47A2Q86VL8 602 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 C17orf82Q86X59 251 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 IQCKQ8N0W5 287 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 C17orf53Q8N3J3 647 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 GUF1Q8N442 669 aaKnown RBP3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 POC5Q8NA72 575 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 MCUQ8NE86 351 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 NUP37Q8NFH4 326 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 OR2AP1Q8NGE2 309 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 FBXO30Q8TB52 745 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 PTPMT1Q8WUK0 201 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 SSMEM1Q8WWF3 244 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 PNPLA2Q96AD5 504 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 FAM120BQ96EK7 910 aaKnown RBP3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 CFAP57Q96MR6 1250 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 DESI2Q9BSY9 194 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 THAP2Q9H0W7 228 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 BLZF1Q9H2G9 400 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 TPK1Q9H3S4 243 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 EHD1Q9H4M9 534 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 AGPAT4Q9NRZ5 378 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 DDIT4Q9NX09 232 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 HACD3Q9P035 362 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 CRNNQ9UBG3 495 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 TEKT2Q9UIF3 430 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 MOSPD1Q9UJG1 213 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 COQ4Q9Y3A0 265 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 PTRH2Q9Y3E5 179 aaKnown RBP3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 OR1A2Q9Y585 309 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 MTORP42345 2549 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 MYO7BQ6PIF6 2116 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 CCDC168Q8NDH2 2452 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 PKDREJQ9NTG1 2253 aa3.95□□□□□ -1.78
HMGB3P5-201ENST00000428894 ANKRD36A6QL64 1941 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 GOLGA8QA0A0J9YX86 632 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 A0A1B0GUH1 482 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 LOC105371267A0A1B0GV96 52 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 A0A1W2PR80 420 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 FEZF1A0PJY2 475 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 GOLGA8OA6NCC3 632 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 ZSCAN5CA6NGD5 496 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 AGAP14A8MT82 685 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 GOLGA8NF8WBI6 632 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 RNF103O00237 685 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 HDAC3O15379 428 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 HSF2BPO75031 334 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 UGT2B4P06133 528 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 PORP16435 677 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 CTRB1P17538 263 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 F8A1P23610 371 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 SOX6P35712 828 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms