RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 YAE1D1Q9NRH1 226 aa10.65□□□□□ -0.7
TFF3-202ENST00000398431 ZCCHC3Q9NUD5 404 aaKnown RBP10.65□□□□□ -0.7
TFF3-202ENST00000398431 GPATCH2Q9NW75 528 aa10.65□□□□□ -0.7
TFF3-202ENST00000398431 MKS1Q9NXB0 559 aa10.65□□□□□ -0.7
TFF3-202ENST00000398431 CISD1Q9NZ45 108 aaKnown RBP10.65□□□□□ -0.7
TFF3-202ENST00000398431 NPAP1Q9NZP6 1156 aa10.65□□□□□ -0.7
TFF3-202ENST00000398431 B3GALT5Q9Y2C3 310 aa10.65□□□□□ -0.7
TFF3-202ENST00000398431 DNAJC15Q9Y5T4 150 aa10.65□□□□□ -0.7
TFF3-202ENST00000398431 SNX8Q9Y5X2 465 aa10.65□□□□□ -0.7
TFF3-202ENST00000398431 GPC6Q9Y625 555 aaPredicted RBP10.65□□□□□ -0.7
TFF3-202ENST00000398431 GOLGA8QA0A0J9YX86 632 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 GOLGA8OA6NCC3 632 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 RNF212BA8MTL3 300 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 GOLGA8NF8WBI6 632 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 ETV2O00321 342 aaPredicted RBP10.64□□□□□ -0.71
TFF3-202ENST00000398431 SMAD9O15198 467 aaKnown RBP10.64□□□□□ -0.71
TFF3-202ENST00000398431 LYZL6O75951 148 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 PGM3O95394 542 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 FGF4P08620 206 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 LAMP1P11279 417 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 IGHV1-2P23083 117 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 CCT3P49368 545 aaKnown RBP10.64□□□□□ -0.71
TFF3-202ENST00000398431 ATP12AP54707 1039 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 SUMO3P55854 103 aaPredicted RBP10.64□□□□□ -0.71
TFF3-202ENST00000398431 RAC3P60763 192 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 RPL38P63173 70 aaKnown RBP10.64□□□□□ -0.71
TFF3-202ENST00000398431 LIPMQ5VYY2 423 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 KANK2Q63ZY3 851 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 PODNL1Q6PEZ8 512 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 C10orf107Q8IVU9 208 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 OR10H5Q8NGA6 315 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 JADE3Q92613 823 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 MRGPRX4Q96LA9 322 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 ZNF300Q96RE9 604 aaPredicted RBP10.64□□□□□ -0.71
TFF3-202ENST00000398431 HOXD1Q9GZZ0 328 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 GIMAP2Q9UG22 337 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 FIS1Q9Y3D6 152 aa10.64□□□□□ -0.71
TFF3-202ENST00000398431 PLCE1Q9P212 2302 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 CUBNO60494 3623 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 IGHV4-30-2A0A087WSY4 118 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 GJE1A6NN92 205 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 CYTIPO60759 359 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 DNAJA2O60884 412 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 H6PDO95479 791 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 NUDT14O95848 222 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 TP53P04637 393 aaPredicted RBP10.63□□□□□ -0.71
TFF3-202ENST00000398431 CREB1P16220 341 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 KRT4P19013 534 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 NTF4P34130 210 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 ASMTP46597 345 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 IRX1P78414 480 aaPredicted RBP10.63□□□□□ -0.71
TFF3-202ENST00000398431 PPA1Q15181 289 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 DCST2Q5T1A1 773 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.63□□□□□ -0.71
TFF3-202ENST00000398431 R3HCC1LQ7Z5L2 792 aaKnown RBP10.63□□□□□ -0.71
TFF3-202ENST00000398431 C4orf33Q8N1A6 199 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 OR5W2Q8NH69 310 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 COQ8BQ96D53 544 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 CHMP6Q96FZ7 201 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 ACTRT3Q9BYD9 372 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 INTS9Q9NV88 658 aaKnown RBP10.63□□□□□ -0.71
TFF3-202ENST00000398431 KCNE5Q9UJ90 142 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 TMED5Q9Y3A6 229 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 DTNAQ9Y4J8 743 aa10.63□□□□□ -0.71
TFF3-202ENST00000398431 ZNF724A8MTY0 619 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 A8MV72 311 aaPredicted RBP10.62□□□□□ -0.71
TFF3-202ENST00000398431 TMEM233B4DJY2 109 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 E7EQL1 145 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 GTPBP1O00178 669 aaKnown RBP10.62□□□□□ -0.71
TFF3-202ENST00000398431 SCAMP2O15127 329 aaKnown RBP10.62□□□□□ -0.71
TFF3-202ENST00000398431 TYROBPO43914 113 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 SSX4O60224 188 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 EIF4E2O60573 245 aaKnown RBP10.62□□□□□ -0.71
TFF3-202ENST00000398431 CHRNGP07510 517 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 NEFHP12036 1026 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 COX5AP20674 150 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 ATP6V1C1P21283 382 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 RASGEF1BQ0VAM2 473 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 SELENBP1Q13228 472 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 PCLAFQ15004 111 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 QPRTQ15274 297 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 GALNTL6Q49A17 601 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 TIMM23BQ5SRD1 257 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 C11orf71Q6IPW1 123 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 ZNF433Q8N7K0 673 aaPredicted RBP10.62□□□□□ -0.71
TFF3-202ENST00000398431 ADAMTS15Q8TE58 950 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 DYDC1Q8WWB3 177 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 OR5P2Q8WZ92 322 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 APOPT1Q96IL0 206 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 C3orf30Q96M34 536 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 OR7D2Q96RA2 312 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 SDF2Q99470 211 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 QRSL1Q9H0R6 528 aaKnown RBP10.62□□□□□ -0.71
TFF3-202ENST00000398431 KLHL9Q9P2J3 617 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 TRAF6Q9Y4K3 522 aa10.62□□□□□ -0.71
TFF3-202ENST00000398431 CENPVL1A0A0U1RR11 272 aa10.61□□□□□ -0.71
TFF3-202ENST00000398431 H3BNH8 94 aa10.61□□□□□ -0.71
TFF3-202ENST00000398431 ABCD4O14678 606 aa10.61□□□□□ -0.71
TFF3-202ENST00000398431 PIP5K1BO14986 540 aa10.61□□□□□ -0.71
TFF3-202ENST00000398431 ZNF264O43296 627 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms