RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 CSTAP01040 98 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 PRR23D2P0DMB1 279 aaPredicted RBP23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 FGF9P31371 208 aaPredicted RBP23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 PSPHP78330 225 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 CRYZQ08257 329 aaKnown RBP23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 TTLL10Q6ZVT0 673 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 LAX1Q8IWV1 398 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 TMEM99Q8N816 258 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 MED18Q9BUE0 208 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 YIPF2Q9BWQ6 316 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 MCCC2Q9HCC0 563 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 SLC35A3Q9Y2D2 325 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 CEP192Q8TEP8 1941 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 C12orf71A8MTZ7 269 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 H3BMH7 237 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 OR2B3O76000 313 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 CELP19835 753 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 AGAP7PQ5VUJ5 663 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 KLBQ86Z14 1044 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 SIX5Q8N196 739 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 ACBD7Q8N6N7 88 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 ZSCAN1Q8NBB4 408 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 OR4C6Q8NH72 309 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 AHCYL2Q96HN2 611 aaKnown RBP23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 LMF1Q96S06 567 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 ISG20L2Q9H9L3 353 aaKnown RBP23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 PLEKHB1Q9UF11 243 aaPredicted RBP23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 PRODH2Q9UF12 536 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 GSTK1Q9Y2Q3 226 aa23.55■■□□□ 1.36
SMARCD3-203ENST00000392811 TRDV1A0A1B0GX56 115 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 CCDC182A6NF36 153 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 TTC36A6NLP5 189 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 RIIAD1A6NNX1 92 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 OR1D4P47884 311 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 SLC9A3P48764 834 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 CSTF1Q05048 431 aaKnown RBP23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 CDC20Q12834 499 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 TBC1D25Q3MII6 688 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 PTCRAQ6ISU1 281 aaPredicted RBP23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 DCLRE1CQ96SD1 692 aaKnown RBP23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 TMED9Q9BVK6 235 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 EFCAB7A8K855 629 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 NOS3P29474 1203 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 ARMC4Q5T2S8 1044 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 RTL4Q6ZR62 310 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 CADM3Q8N126 398 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 SPEM1Q8N4L4 309 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 ZNF321PQ8N8H1 164 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 PTPMT1Q8WUK0 201 aaPredicted RBP23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 EFHD2Q96C19 240 aaPredicted RBP23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 SENP5Q96HI0 755 aaPredicted RBP23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 SHDQ96IW2 340 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 WDFY2Q96P53 400 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 TBX5Q99593 518 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 OR51V1Q9H2C8 321 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 TBC1D17Q9HA65 648 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 PNO1Q9NRX1 252 aaKnown RBP23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 WNT16Q9UBV4 365 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 BAIAP2Q9UQB8 552 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 CMAHPQ9Y471 501 aa23.54■■□□□ 1.36
SMARCD3-203ENST00000392811 IGHV1OR21-1A0A087WYE8 117 aa23.53■■□□□ 1.36
SMARCD3-203ENST00000392811 TMEM150CB9EJG8 249 aa23.53■■□□□ 1.36
SMARCD3-203ENST00000392811 IL9P15248 144 aa23.53■■□□□ 1.36
SMARCD3-203ENST00000392811 ALAS2P22557 587 aa23.53■■□□□ 1.36
SMARCD3-203ENST00000392811 SLC6A6P31641 620 aa23.53■■□□□ 1.36
SMARCD3-203ENST00000392811 COPZ1P61923 177 aa23.53■■□□□ 1.36
SMARCD3-203ENST00000392811 RPS7P62081 194 aaKnown RBP23.53■■□□□ 1.36
SMARCD3-203ENST00000392811 CRMP1Q14194 572 aa23.53■■□□□ 1.36
SMARCD3-203ENST00000392811 TMPRSS11AQ6ZMR5 421 aa23.53■■□□□ 1.36
SMARCD3-203ENST00000392811 ARIH2OSQ8N7S6 290 aa23.53■■□□□ 1.36
SMARCD3-203ENST00000392811 OR7G1Q8NGA0 311 aa23.53■■□□□ 1.36
SMARCD3-203ENST00000392811 HTRA1Q92743 480 aa23.53■■□□□ 1.36
SMARCD3-203ENST00000392811 TEAD3Q99594 435 aa23.53■■□□□ 1.36
SMARCD3-203ENST00000392811 TIMP4Q99727 224 aa23.53■■□□□ 1.36
SMARCD3-203ENST00000392811 KATNB1Q9BVA0 655 aa23.53■■□□□ 1.36
SMARCD3-203ENST00000392811 ALG8Q9BVK2 526 aa23.53■■□□□ 1.36
SMARCD3-203ENST00000392811 V9GYH0 126 aa23.53■■□□□ 1.36
SMARCD3-203ENST00000392811 SMIM30A4D0T7 59 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 SLC22A31A6NKX4 558 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 REM1O75628 298 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 BIKQ13323 160 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 VASNQ6EMK4 673 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 CYB561A3Q8NBI2 242 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 ATP6V1C2Q8NEY4 427 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 HLA-CQ95604 372 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 CLIP3Q96DZ5 547 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 CCDC32Q9BV29 185 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 CPNE5Q9HCH3 593 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 TRAPPC4Q9Y296 219 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 CLUP10909 449 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 PEPDP12955 493 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 ZNF3P17036 446 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 HK1P19367 917 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 SLC2A5P22732 501 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 SLC16A1P53985 500 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 HSD11B2P80365 405 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 CFHR1Q03591 330 aa23.52■■□□□ 1.36
SMARCD3-203ENST00000392811 KLHL26Q53HC5 615 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms