RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 PRAMEF20Q5VT98 475 aa24.46■■□□□ 1.51
MSX1-201ENST00000382723 MPP4Q96JB8 637 aa24.46■■□□□ 1.51
MSX1-201ENST00000382723 CDC40O60508 579 aaKnown RBP eCLIP24.45■■□□□ 1.51
MSX1-201ENST00000382723 OSMP13725 252 aa24.45■■□□□ 1.51
MSX1-201ENST00000382723 SDHBP21912 280 aa24.45■■□□□ 1.51
MSX1-201ENST00000382723 C8orf59Q8N0T1 100 aaPredicted RBP24.45■■□□□ 1.51
MSX1-201ENST00000382723 FER1L6-AS2Q96M78 137 aa24.45■■□□□ 1.51
MSX1-201ENST00000382723 HS6ST2Q96MM7 605 aa24.45■■□□□ 1.51
MSX1-201ENST00000382723 KRCC1Q9NPI7 259 aaPredicted RBP24.45■■□□□ 1.51
MSX1-201ENST00000382723 MED11Q9P086 117 aa24.45■■□□□ 1.51
MSX1-201ENST00000382723 PPP4R1LQ9P1A2 415 aa24.45■■□□□ 1.51
MSX1-201ENST00000382723 MED31Q9Y3C7 131 aa24.45■■□□□ 1.51
MSX1-201ENST00000382723 EXPH5Q8NEV8 1989 aa24.45■■□□□ 1.5
MSX1-201ENST00000382723 H3BN98 237 aa24.45■■□□□ 1.5
MSX1-201ENST00000382723 PRKAR1AP10644 381 aa24.45■■□□□ 1.5
MSX1-201ENST00000382723 RAPSNQ13702 412 aa24.45■■□□□ 1.5
MSX1-201ENST00000382723 MEP1AQ16819 746 aa24.45■■□□□ 1.5
MSX1-201ENST00000382723 SWT1Q5T5J6 900 aaKnown RBP24.45■■□□□ 1.5
MSX1-201ENST00000382723 JMJD6Q6NYC1 403 aaPredicted RBP24.45■■□□□ 1.5
MSX1-201ENST00000382723 RNF113BQ8IZP6 322 aaKnown RBP24.45■■□□□ 1.5
MSX1-201ENST00000382723 CLEC1AQ8NC01 280 aa24.45■■□□□ 1.5
MSX1-201ENST00000382723 C20orf141Q9NUB4 165 aa24.45■■□□□ 1.5
MSX1-201ENST00000382723 ENOPH1Q9UHY7 261 aa24.45■■□□□ 1.5
MSX1-201ENST00000382723 WIF1Q9Y5W5 379 aa24.45■■□□□ 1.5
MSX1-201ENST00000382723 IFI30P13284 250 aa24.44■■□□□ 1.5
MSX1-201ENST00000382723 CHMP24386 653 aa24.44■■□□□ 1.5
MSX1-201ENST00000382723 SLC1A3P43003 542 aa24.44■■□□□ 1.5
MSX1-201ENST00000382723 CHN2P52757 468 aa24.44■■□□□ 1.5
MSX1-201ENST00000382723 AIMP2Q13155 320 aaKnown RBP24.44■■□□□ 1.5
MSX1-201ENST00000382723 TTC33Q6PID6 262 aaPredicted RBP24.44■■□□□ 1.5
MSX1-201ENST00000382723 LINC00114Q6XXX2 140 aa24.44■■□□□ 1.5
MSX1-201ENST00000382723 BEST3Q8N1M1 668 aa24.44■■□□□ 1.5
MSX1-201ENST00000382723 GPR119Q8TDV5 335 aa24.44■■□□□ 1.5
MSX1-201ENST00000382723 MEPEQ9NQ76 525 aaPredicted RBP24.44■■□□□ 1.5
MSX1-201ENST00000382723 SDHAF3Q9NRP4 125 aa24.44■■□□□ 1.5
MSX1-201ENST00000382723 NDRG4Q9ULP0 352 aaKnown RBP24.44■■□□□ 1.5
MSX1-201ENST00000382723 HRH3Q9Y5N1 445 aa24.44■■□□□ 1.5
MSX1-201ENST00000382723 B4DXG7 233 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 NKX2-8O15522 239 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 CCL3P10147 92 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 RBM34P42696 430 aaKnown RBP24.43■■□□□ 1.5
MSX1-201ENST00000382723 CRISP1P54107 249 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 COX10Q12887 443 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 TSPAN31Q12999 210 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 KEAP1Q14145 624 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 TBC1D25Q3MII6 688 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 ZNF691Q5VV52 312 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 CD300LDQ6UXZ3 194 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 DND1Q8IYX4 353 aaKnown RBP24.43■■□□□ 1.5
MSX1-201ENST00000382723 ZNF426Q9BUY5 554 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 DSN1Q9H410 356 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 A0A087WUJ7 227 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 ELOA3DA6NLF2 546 aaPredicted RBP24.43■■□□□ 1.5
MSX1-201ENST00000382723 GSTM3P21266 225 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 TACR3P29371 465 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 ESRRGP62508 458 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 CLN3Q13286 438 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 QPRTQ15274 297 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 INPP5JQ15735 1006 aaPredicted RBP24.43■■□□□ 1.5
MSX1-201ENST00000382723 ELOA3BQ3SY89 546 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 TMEM236Q5W0B7 351 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 POMZP3Q6PJE2 187 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 ATG4DQ86TL0 474 aaPredicted RBP24.43■■□□□ 1.5
MSX1-201ENST00000382723 ELOA3Q8NG57 546 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 DPH1Q9BZG8 443 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 STMN3Q9NZ72 180 aa24.43■■□□□ 1.5
MSX1-201ENST00000382723 ARGFXA6NJG6 315 aa24.42■■□□□ 1.5
MSX1-201ENST00000382723 GP1BBP13224 206 aa24.42■■□□□ 1.5
MSX1-201ENST00000382723 FPR3P25089 353 aa24.42■■□□□ 1.5
MSX1-201ENST00000382723 MYBPC1Q00872 1141 aa24.42■■□□□ 1.5
MSX1-201ENST00000382723 PRKCDQ05655 676 aa24.42■■□□□ 1.5
MSX1-201ENST00000382723 PTGES3Q15185 160 aaKnown RBP24.42■■□□□ 1.5
MSX1-201ENST00000382723 THAP5Q7Z6K1 395 aa24.42■■□□□ 1.5
MSX1-201ENST00000382723 GATA6Q92908 595 aa24.42■■□□□ 1.5
MSX1-201ENST00000382723 HRASLS5Q96KN8 279 aa24.42■■□□□ 1.5
MSX1-201ENST00000382723 LHPPQ9H008 270 aa24.42■■□□□ 1.5
MSX1-201ENST00000382723 ING2Q9H160 280 aa24.42■■□□□ 1.5
MSX1-201ENST00000382723 CDC42EP2O14613 210 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 TP53P04637 393 aaPredicted RBP24.41■■□□□ 1.5
MSX1-201ENST00000382723 PNMTP11086 282 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 WT1P19544 449 aaPredicted RBP24.41■■□□□ 1.5
MSX1-201ENST00000382723 MAKP20794 623 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 IL5RAQ01344 420 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 SLC22A10Q63ZE4 541 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 CDK20Q8IZL9 346 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 CYP4Z2PQ8N1L4 340 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 PAQR8Q8TEZ7 354 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 BPIFA2Q96DR5 249 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 ADAM19Q9H013 955 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 EGLN3Q9H6Z9 239 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 PNPLA3Q9NST1 481 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 TAS2R10Q9NYW0 307 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 TEKT2Q9UIF3 430 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 HEATR5AQ86XA9 2040 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 ANKUB1A6NFN9 424 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 E9PQ18 207 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 G3V3Y1 287 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 KLF4O43474 513 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 F10P00742 488 aa24.41■■□□□ 1.5
MSX1-201ENST00000382723 FUT1P19526 365 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms