RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 CMIPQ8IY22 773 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 ANKFN1Q8N957 763 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 OR9I1Q8NGQ6 314 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 CCDC28BQ9BUN5 200 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 FANCFQ9NPI8 374 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 EXOSC3Q9NQT5 275 aaKnown RBP15.06■□□□□ 0
HMGN4-201ENST00000377575 SERINC1Q9NRX5 453 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 EDARQ9UNE0 448 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 SPG11Q96JI7 2443 aa15.06■□□□□ 0
HMGN4-201ENST00000377575 PRAMEF27A3QJZ7 478 aa15.05■□□□□ -0
HMGN4-201ENST00000377575 C1QCP02747 245 aa15.05■□□□□ -0
HMGN4-201ENST00000377575 CHRM4P08173 479 aa15.05■□□□□ -0
HMGN4-201ENST00000377575 KCNJ10P78508 379 aa15.05■□□□□ -0
HMGN4-201ENST00000377575 RNPS1Q15287 305 aaKnown RBP15.05■□□□□ -0
HMGN4-201ENST00000377575 COX20Q5RI15 118 aa15.05■□□□□ -0
HMGN4-201ENST00000377575 ZNF474Q6S9Z5 364 aaPredicted RBP15.05■□□□□ -0
HMGN4-201ENST00000377575 ARFGAP2Q8N6H7 521 aa15.05■□□□□ -0
HMGN4-201ENST00000377575 ATP6V1C2Q8NEY4 427 aa15.05■□□□□ -0
HMGN4-201ENST00000377575 ZNF563Q8TA94 476 aa15.05■□□□□ -0
HMGN4-201ENST00000377575 RNF128Q8TEB7 428 aa15.05■□□□□ -0
HMGN4-201ENST00000377575 SLC25A43Q8WUT9 341 aaPredicted RBP15.05■□□□□ -0
HMGN4-201ENST00000377575 WDR60Q8WVS4 1066 aa15.05■□□□□ -0
HMGN4-201ENST00000377575 PMM1Q92871 262 aa15.05■□□□□ -0
HMGN4-201ENST00000377575 QRSL1Q9H0R6 528 aaKnown RBP15.05■□□□□ -0
HMGN4-201ENST00000377575 SLC38A1Q9H2H9 487 aa15.05■□□□□ -0
HMGN4-201ENST00000377575 ACER3Q9NUN7 267 aa15.05■□□□□ -0
HMGN4-201ENST00000377575 THUMPD1Q9NXG2 353 aaKnown RBP15.05■□□□□ -0
HMGN4-201ENST00000377575 CALML5Q9NZT1 146 aa15.05■□□□□ -0
HMGN4-201ENST00000377575 CLEC4AQ9UMR7 237 aa15.05■□□□□ -0
HMGN4-201ENST00000377575 TESMINQ9Y4I5 508 aa15.05■□□□□ -0
HMGN4-201ENST00000377575 SPIN1Q9Y657 262 aaPredicted RBP15.05■□□□□ -0
HMGN4-201ENST00000377575 TMEM247A6NEH6 219 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 AGAP5A6NIR3 686 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 CASKO14936 926 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 EFNA2O43921 213 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 AGTR1P30556 359 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 UGT2B10P36537 528 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 CRATP43155 626 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 IDH3AP50213 366 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 AQP5P55064 265 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 SESN3P58005 492 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 IRX1P78414 480 aaPredicted RBP15.04■□□□□ -0
HMGN4-201ENST00000377575 FAM27E3Q08E93 113 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 MERTKQ12866 999 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 FCRLAQ7L513 359 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 STK32CQ86UX6 486 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 CDC20BQ86Y33 519 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 PEX5LQ8IYB4 626 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 NINJ1Q92982 152 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 VPS33AQ96AX1 596 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 MAGEB18Q96M61 343 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 EBF4Q9BQW3 602 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 SRXN1Q9BYN0 137 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 RAD21L1Q9H4I0 556 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 COQ10BQ9H8M1 238 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 MTHFD2LQ9H903 347 aaPredicted RBP15.04■□□□□ -0
HMGN4-201ENST00000377575 TPT1P8Q9HAU6 139 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 SLC6A13Q9NSD5 602 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 ZNF226Q9NYT6 803 aa15.04■□□□□ -0
HMGN4-201ENST00000377575 C16orf97H3BN30 126 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 DBIP07108 87 aaKnown RBP15.03■□□□□ -0
HMGN4-201ENST00000377575 UQCRBP14927 111 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 IL7RP16871 459 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 RPS4Y1P22090 263 aaKnown RBP15.03■□□□□ -0
HMGN4-201ENST00000377575 DNAJA1P31689 397 aaKnown RBP15.03■□□□□ -0
HMGN4-201ENST00000377575 APOBEC1P41238 236 aaKnown RBP15.03■□□□□ -0
HMGN4-201ENST00000377575 CRISP3P54108 245 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 RAC3P60763 192 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 DSTNP60981 165 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 TMEM201Q5SNT2 666 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 PLEKHM3Q6ZWE6 761 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 HMGN2P46Q86SG4 172 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 SLC43A2Q8N370 569 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 ZNF610Q8N9Z0 462 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 ABHD3Q8WU67 409 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 CKAP2Q8WWK9 683 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 ROBO4Q8WZ75 1007 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 ZNF524Q96C55 264 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 ZG16BQ96DA0 208 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 OR5B2Q96R09 309 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 TACO1Q9BSH4 297 aaKnown RBP15.03■□□□□ -0
HMGN4-201ENST00000377575 MED18Q9BUE0 208 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 CACYBPQ9HB71 228 aaKnown RBP15.03■□□□□ -0
HMGN4-201ENST00000377575 GP6Q9HCN6 339 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 PLSCR4Q9NRQ2 329 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 KLHL13Q9P2N7 655 aa15.03■□□□□ -0
HMGN4-201ENST00000377575 CELSR1Q9NYQ6 3014 aa15.02■□□□□ -0
HMGN4-201ENST00000377575 BCAS1O75363 584 aaPredicted RBP15.02■□□□□ -0
HMGN4-201ENST00000377575 BCHEP06276 602 aa15.02■□□□□ -0
HMGN4-201ENST00000377575 ETFAP13804 333 aa15.02■□□□□ -0
HMGN4-201ENST00000377575 NID1P14543 1247 aa15.02■□□□□ -0
HMGN4-201ENST00000377575 CCKARP32238 428 aa15.02■□□□□ -0
HMGN4-201ENST00000377575 RYKP34925 604 aa15.02■□□□□ -0
HMGN4-201ENST00000377575 MVDP53602 400 aa15.02■□□□□ -0
HMGN4-201ENST00000377575 CSNK2A1P68400 391 aaPredicted RBP15.02■□□□□ -0
HMGN4-201ENST00000377575 EXOC3L2Q2M3D2 409 aa15.02■□□□□ -0
HMGN4-201ENST00000377575 GTDC1Q4AE62 458 aa15.02■□□□□ -0
HMGN4-201ENST00000377575 LIN52Q52LA3 116 aa15.02■□□□□ -0
HMGN4-201ENST00000377575 SYT14P1Q58G82 188 aa15.02■□□□□ -0
HMGN4-201ENST00000377575 BEND4Q6ZU67 534 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms