RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 JRKO75564 520 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 CDK2P24941 298 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 EIF4HQ15056 248 aaKnown RBP13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 ZNF836Q6ZNA1 936 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 OLIG3Q7RTU3 272 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 DEFB124Q8NES8 71 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 TMEM185AQ8NFB2 350 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 C3orf30Q96M34 536 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 SNX18Q96RF0 628 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 CHRDQ9H2X0 955 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 PELI2Q9HAT8 420 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 CD93Q9NPY3 652 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 TM7SF3Q9NS93 570 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 LOC105369274A0A096LPK9 316 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 H0Y8G0 127 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 TIMM8AO60220 97 aaPredicted RBP13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 FAPQ12884 760 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 ZNF750Q32MQ0 723 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 PAN3Q58A45 887 aaKnown RBP13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 ZNF529Q6P280 563 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 OR4N4Q8N0Y3 316 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 TXNDC15Q96J42 360 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 SAP130Q9H0E3 1048 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 MAGIXQ9H6Y5 334 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 VAPAQ9P0L0 249 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 ZCWPW2A0A1B0GU75 182 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 CD300LBA8K4G0 201 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 B3GALT4O96024 378 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 IGHV3-9P01782 118 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 SLC9A3R2Q15599 337 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 LTB4RQ15722 352 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 SGPP2Q8IWX5 399 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 CMTM1Q8IZ96 169 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 LIN37Q96GY3 246 aaPredicted RBP13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 DUSP23Q9BVJ7 150 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 KLHL13Q9P2N7 655 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 AK1P00568 194 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 HBQ1P09105 142 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 CLDN12P56749 244 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 METTL25Q8N6Q8 603 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 BORCS7Q96B45 105 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 BPIFA2Q96DR5 249 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 SYT3Q9BQG1 590 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 DHCR7Q9UBM7 475 aaKnown RBP13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 IDH3GP51553 393 aaPredicted RBP13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 GTF2H4Q92759 462 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 ELMOD3Q96FG2 381 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 OR10A5Q9H207 317 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 OR10A2Q9H208 303 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 FMN2Q9NZ56 1722 aa13.78□□□□□ -0.2
NOTCH4-201ENST00000375023 F5H5P2 479 aa13.77□□□□□ -0.2
NOTCH4-201ENST00000375023 PHYHO14832 338 aa13.77□□□□□ -0.2
NOTCH4-201ENST00000375023 PRPS1P60891 318 aa13.77□□□□□ -0.2
NOTCH4-201ENST00000375023 NDUFAF7Q7L592 441 aa13.77□□□□□ -0.2
NOTCH4-201ENST00000375023 C17orf50Q8WW18 174 aa13.77□□□□□ -0.2
NOTCH4-201ENST00000375023 DCLRE1CQ96SD1 692 aaKnown RBP13.77□□□□□ -0.2
NOTCH4-201ENST00000375023 CLDN17P56750 224 aa13.77□□□□□ -0.2
NOTCH4-201ENST00000375023 CTSL3PQ5NE16 218 aa13.77□□□□□ -0.2
NOTCH4-201ENST00000375023 INTS14Q96SY0 518 aa13.77□□□□□ -0.2
NOTCH4-201ENST00000375023 NGBQ9NPG2 151 aa13.77□□□□□ -0.2
NOTCH4-201ENST00000375023 UGT2B7P16662 529 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 OMGP23515 440 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 OPRL1P41146 370 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 CDK5R2Q13319 367 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 MELKQ14680 651 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 MLF2Q15773 248 aaPredicted RBP13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 ACSM3Q53FZ2 586 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 PCNPQ8WW12 178 aaKnown RBP13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 FAM122AQ96E09 287 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 ZIC5Q96T25 663 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 INIPQ9NRY2 104 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 CBLCQ9ULV8 474 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 A0A1W2PQ09 198 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 GAAP10253 952 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 CRABP1P29762 137 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 GLO1Q04760 184 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 PLA2G7Q13093 441 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 GK3PQ14409 553 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 OR1Q1Q15612 314 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 PODNL1Q6PEZ8 512 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 CYP4V2Q6ZWL3 525 aaPredicted RBP13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 ANKRD13BQ86YJ7 626 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 MALSU1Q96EH3 234 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 ZBED3Q96IU2 234 aaPredicted RBP13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 BMFQ96LC9 184 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 SLC30A3Q99726 388 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 HOXD1Q9GZZ0 328 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 WDR6Q9NNW5 1121 aaKnown RBP13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 MEPEQ9NQ76 525 aaPredicted RBP13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 SLAMF8Q9P0V8 285 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 FAM208AQ9UK61 1670 aaKnown RBP13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 FAM90A27PA6NNH2 459 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 DENRO43583 198 aaKnown RBP13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 IFNA4P05014 189 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 TMEM176BQ3YBM2 270 aaPredicted RBP13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 AGAP7PQ5VUJ5 663 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 AGAP6Q5VW22 663 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 NIPAL3Q6P499 406 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 PPP1R3BQ86XI6 285 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 CCDC71LQ8N9Z2 235 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms