RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 CA10Q9NS85 328 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 NUP210Q8TEM1 1887 aaPredicted RBP13.73□□□□□ -0.21
COL9A2-202ENST00000372748 hCG_1807616A0A1W2PRN6 198 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 CARNS1A5YM72 827 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 LRIT2A6NDA9 550 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 LGALS8O00214 317 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 SCAMP1O15126 338 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 FCER2P06734 321 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 CXCL2P19875 107 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 ANXA11P50995 505 aaKnown RBP13.73□□□□□ -0.21
COL9A2-202ENST00000372748 GBX2P52951 348 aaPredicted RBP13.73□□□□□ -0.21
COL9A2-202ENST00000372748 SLC9A5Q14940 896 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 SFRP5Q5T4F7 317 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 FAM122CQ6P4D5 195 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 LINGO2Q7L985 606 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 GJD3Q8N144 294 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 MOSPD2Q8NHP6 518 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 WDR26Q9H7D7 661 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 PELI2Q9HAT8 420 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 WASH6PQ9NQA3 447 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 POMT2Q9UKY4 750 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 RNF215Q9Y6U7 377 aa13.73□□□□□ -0.21
COL9A2-202ENST00000372748 TRPM6Q9BX84 2022 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 A0A1W2PPV9 198 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 VEGFDO43915 354 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 PPM1BO75688 479 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 FGF19O95750 216 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 PRG2P13727 222 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 IL9P15248 144 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 MAKP20794 623 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 CSNK1G2P78368 415 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 DPTQ07507 201 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 HACD4Q5VWC8 232 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 SLC25A25Q6KCM7 469 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 THSD4Q6ZMP0 1018 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 ERN2Q76MJ5 926 aaKnown RBP13.72□□□□□ -0.21
COL9A2-202ENST00000372748 HDDC2Q7Z4H3 204 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 PXKQ7Z7A4 578 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 SERPINA12Q8IW75 414 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 LINC01555Q8NAE3 123 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 SLC16A11Q8NCK7 471 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 OR6M1Q8NGM8 313 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 OR5K2Q8NHB8 316 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 DOK4Q8TEW6 326 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 ST8SIA4Q92187 359 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 PAWRQ96IZ0 340 aaKnown RBP13.72□□□□□ -0.21
COL9A2-202ENST00000372748 TEAD3Q99594 435 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 JAM3Q9BX67 310 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 OR1A2Q9Y585 309 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 IGLON5A6NGN9 336 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 ARPC1BO15143 372 aaKnown RBP13.72□□□□□ -0.21
COL9A2-202ENST00000372748 AIFM1O95831 613 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 ADH1CP00326 375 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 GKN3PP0CG01 181 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 EPXP11678 715 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 PTHLHP12272 177 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 UGT2B7P16662 529 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 P2RY2P41231 377 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 KIAA1024LP59773 190 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 PITPNAQ00169 270 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 ELAVL3Q14576 367 aaKnown RBP13.72□□□□□ -0.21
COL9A2-202ENST00000372748 TP53I3Q53FA7 332 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 ALKAL2Q6UX46 152 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 WDR88Q6ZMY6 472 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 CFAP77Q6ZQR2 320 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 TMIEQ8NEW7 156 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 COQ8AQ8NI60 647 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 LGALS14Q8TCE9 139 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 HAVCR2Q8TDQ0 301 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 COL26A1Q96A83 441 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 DERL3Q96Q80 235 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 IFT27Q9BW83 186 aa13.72□□□□□ -0.21
COL9A2-202ENST00000372748 SIDT1Q9NXL6 827 aaKnown RBP13.72□□□□□ -0.21
COL9A2-202ENST00000372748 IGKV1-8A0A0C4DH67 115 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 EDDM13A0A1B0GTR0 161 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 UNC119BA6NIH7 251 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 BET1O15155 118 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 BMP7P18075 431 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 NUP62P37198 522 aaPredicted RBP13.71□□□□□ -0.21
COL9A2-202ENST00000372748 WASP42768 502 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 RAD52P43351 418 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 PRR5P85299 388 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 ZNF85Q03923 595 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 NHLRC3Q5JS37 347 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 SLC22A10Q63ZE4 541 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 C3P1Q6ZMU1 363 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 OR56A1Q8NGH5 318 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 OR52L1Q8NGH7 329 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 WFIKKN2Q8TEU8 576 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 PEX11GQ96HA9 241 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 C1QTNF2Q9BXJ5 285 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 LIN7BQ9HAP6 207 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 DEC1Q9P2X7 70 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 MGAT4CQ9UBM8 478 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 NPTNQ9Y639 398 aa13.71□□□□□ -0.21
COL9A2-202ENST00000372748 PRR23D1E9PI22 279 aaPredicted RBP13.71□□□□□ -0.22
COL9A2-202ENST00000372748 MID1O15344 667 aa13.71□□□□□ -0.22
COL9A2-202ENST00000372748 SC5DO75845 299 aa13.71□□□□□ -0.22
COL9A2-202ENST00000372748 PRR23D2P0DMB1 279 aaPredicted RBP13.71□□□□□ -0.22
COL9A2-202ENST00000372748 CERS1P27544 350 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms