RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 AKAP1Q92667 903 aaKnown RBP eCLIP13.19□□□□□ -0.3
CTSD-202ENST00000367196 FBXW5Q969U6 566 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 ZHX1-C8orf76Q96EF9 292 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 KLHDC3Q9BQ90 382 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 ZNF350Q9GZX5 532 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 ZNF701Q9NV72 531 aaPredicted RBP13.19□□□□□ -0.3
CTSD-202ENST00000367196 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.19□□□□□ -0.3
CTSD-202ENST00000367196 RAP2CQ9Y3L5 183 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 HIVEP2P31629 2446 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 PRSS51A0A1B0GVH4 220 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 EFNA2O43921 213 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 KIAA0513O60268 411 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 CNOT4O95628 575 aaKnown RBP13.18□□□□□ -0.3
CTSD-202ENST00000367196 LY6G6DO95868 133 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 UQCRC2P22695 453 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 FKBP2P26885 142 aaKnown RBP13.18□□□□□ -0.3
CTSD-202ENST00000367196 OR3A2P47893 321 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 KHKP50053 298 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 RPL14P50914 215 aaKnown RBP13.18□□□□□ -0.3
CTSD-202ENST00000367196 ANXA11P50995 505 aaKnown RBP13.18□□□□□ -0.3
CTSD-202ENST00000367196 ATP5J2P56134 94 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 RPS4XP62701 263 aaKnown RBP13.18□□□□□ -0.3
CTSD-202ENST00000367196 RPS26P62854 115 aaKnown RBP13.18□□□□□ -0.3
CTSD-202ENST00000367196 PPP2R2BQ00005 443 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 ZNF844Q08AG5 666 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 CHI3L2Q15782 390 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 ETFDHQ16134 617 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 BHLHA15Q7RTS1 189 aaPredicted RBP13.18□□□□□ -0.3
CTSD-202ENST00000367196 CLECL1Q8IZS7 167 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 MREGQ8N565 214 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 ZNF781Q8N8C0 355 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 NUDT8Q8WV74 236 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 TESCQ96BS2 214 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 TRMT61AQ96FX7 289 aaKnown RBP13.18□□□□□ -0.3
CTSD-202ENST00000367196 PKNOX2Q96KN3 472 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 OR5B2Q96R09 309 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 PSD2Q9BQI7 771 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 THUMPD3Q9BV44 507 aaKnown RBP13.18□□□□□ -0.3
CTSD-202ENST00000367196 OR51I1Q9H343 314 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 AKTIPQ9H8T0 292 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 EMC3Q9P0I2 261 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 MKLN1Q9UL63 735 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 WDR45Q9Y484 360 aa13.18□□□□□ -0.3
CTSD-202ENST00000367196 A0A1W2PNR3 127 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 ZNF724A8MTY0 619 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 SMAD7O15105 426 aaKnown RBP13.17□□□□□ -0.3
CTSD-202ENST00000367196 CYTIPO60759 359 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 DNAJA2O60884 412 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 UGT2B17O75795 530 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 ADAP00813 363 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 UBTFL6P0CB48 400 aaPredicted RBP13.17□□□□□ -0.3
CTSD-202ENST00000367196 CHI3L1P36222 383 aaPredicted RBP13.17□□□□□ -0.3
CTSD-202ENST00000367196 APOBEC1P41238 236 aaKnown RBP13.17□□□□□ -0.3
CTSD-202ENST00000367196 TXNL4AP83876 142 aaKnown RBP13.17□□□□□ -0.3
CTSD-202ENST00000367196 RASGEF1BQ0VAM2 473 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 MERTKQ12866 999 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 TAB1Q15750 504 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 SYT14P1Q58G82 188 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 NCMAPQ5T1S8 102 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 HEPHL1Q6MZM0 1159 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 GALNT5Q7Z7M9 940 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 CROCCP2Q86T23 111 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 TRIML2Q8N7C3 387 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 ZNF563Q8TA94 476 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 IGFBPL1Q8WX77 278 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 MUCL1Q96DR8 90 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 PPP1R36Q96LQ0 422 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 SERHL2Q9H4I8 314 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 ACER3Q9NUN7 267 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 FAIMQ9NVQ4 179 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 LAMP3Q9UQV4 416 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 FREM1Q5H8C1 2179 aa13.17□□□□□ -0.3
CTSD-202ENST00000367196 TLN2Q9Y4G6 2542 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 USF3Q68DE3 2245 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 IGHV3-15A0A0B4J1V0 119 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 WDR91A4D1P6 747 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 TRIM64A6NGJ6 449 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 TRIM64BA6NI03 449 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 ESPNB1AK53 854 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 SULT2B1O00204 365 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 SMAD9O15198 467 aaKnown RBP13.16□□□□□ -0.3
CTSD-202ENST00000367196 CLOCKO15516 846 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 DNPH1O43598 174 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 FCMRO60667 390 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 PLAUP00749 431 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 CREB1P16220 341 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 LBPP18428 481 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 DIO1P49895 249 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 SESN3P58005 492 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 LRRC74AQ0VAA2 488 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 TMPPEQ6ZT21 453 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 GRINAQ7Z429 371 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 P2RY8Q86VZ1 359 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 ZNF100Q8IYN0 542 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 ZNF619Q8N2I2 560 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 CIARTQ8N365 385 aaPredicted RBP13.16□□□□□ -0.3
CTSD-202ENST00000367196 XAGE5Q8WWM1 108 aa13.16□□□□□ -0.3
CTSD-202ENST00000367196 GTPBP3Q969Y2 492 aaKnown RBP13.16□□□□□ -0.3
CTSD-202ENST00000367196 EXOSC3Q9NQT5 275 aaKnown RBP13.16□□□□□ -0.3
CTSD-202ENST00000367196 E9PBE3 544 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms