RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 C17orf105B2RV13 164 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 CLDN4O14493 209 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 SULT1B1O43704 296 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 FAM20BO75063 409 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 STX11O75558 287 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 FADS2O95864 444 aaKnown RBP11.68□□□□□ -0.54
GGPS1-202ENST00000358966 HTR2AP28223 471 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 GGT2P36268 569 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 GPR135Q8IZ08 494 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 D2HGDHQ8N465 521 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 GATSQ8NAP1 163 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 MORN4Q8NDC4 146 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 FBLIM1Q8WUP2 373 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 FAM46AQ96IP4 442 aaKnown RBP11.68□□□□□ -0.54
GGPS1-202ENST00000358966 PITX2Q99697 317 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 MCHR1Q99705 422 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 DPYSL5Q9BPU6 564 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 RANGRFQ9HD47 186 aaPredicted RBP11.68□□□□□ -0.54
GGPS1-202ENST00000358966 NLGN3Q9NZ94 848 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 MRPS33Q9Y291 106 aaKnown RBP11.68□□□□□ -0.54
GGPS1-202ENST00000358966 TMEM5Q9Y2B1 443 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 CSNK1G3Q9Y6M4 447 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 MPDZO75970 2070 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 KNTC1P50748 2209 aa11.68□□□□□ -0.54
GGPS1-202ENST00000358966 FITM1A5D6W6 292 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 PTP4A3O75365 173 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 CYP7B1O75881 506 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 CCNYL3P0C7X3 344 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 IL7P13232 177 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 MAP3K8P41279 467 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 GPR3P46089 330 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 GPR4P46093 362 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 DGCR6Q14129 220 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 FLYWCH1Q4VC44 716 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 CLEC12AQ5QGZ9 265 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 WDR88Q6ZMY6 472 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 LANCL3Q6ZV70 420 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 ZNF595Q8IYB9 648 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 PRR22Q8IZ63 422 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 ZNF619Q8N2I2 560 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 SVOPQ8N4V2 548 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 SETD9Q8NE22 299 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 OR4C6Q8NH72 309 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 DIO2Q92813 273 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 ZNF501Q96CX3 271 aaPredicted RBP11.67□□□□□ -0.54
GGPS1-202ENST00000358966 VSTM2LQ96N03 204 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 ARHGDIGQ99819 225 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 BEX2Q9BXY8 128 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 YTHDF1Q9BYJ9 559 aaKnown RBP11.67□□□□□ -0.54
GGPS1-202ENST00000358966 PRRG3Q9BZD7 231 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 RAB33BQ9H082 229 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 MTHFD2LQ9H903 347 aaPredicted RBP11.67□□□□□ -0.54
GGPS1-202ENST00000358966 FTSJ1Q9UET6 329 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 LAMA5O15230 3695 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 PRSS44E7EML9 344 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 GMFGO60234 142 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 MT-ND2P03891 347 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 ADRA2AP08913 450 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 CT45A8P0DMV1 189 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 CT45A9P0DMV2 189 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 MASP1P48740 699 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 ZNF136P52737 540 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 VBP1P61758 197 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 EEF1A1P68104 462 aaKnown RBP11.67□□□□□ -0.54
GGPS1-202ENST00000358966 CT45A2Q5DJT8 189 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 RBM48Q5RL73 367 aaKnown RBP11.67□□□□□ -0.54
GGPS1-202ENST00000358966 ARHGAP40Q5TG30 622 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 PRICKLE2Q7Z3G6 844 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 GRHL3Q8TE85 626 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 CNOT9Q92600 299 aaKnown RBP11.67□□□□□ -0.54
GGPS1-202ENST00000358966 SLC41A2Q96JW4 573 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 OR6C1Q96RD1 312 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 NODALQ96S42 347 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 CD180Q99467 661 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 POLR2J3Q9H1A7 115 aaKnown RBP11.67□□□□□ -0.54
GGPS1-202ENST00000358966 DUSP22Q9NRW4 184 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 GPR83Q9NYM4 423 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 SLC7A7Q9UM01 511 aa11.67□□□□□ -0.54
GGPS1-202ENST00000358966 CCDC163A0A0D9SF12 145 aa11.66□□□□□ -0.54
GGPS1-202ENST00000358966 A0A1W2PRQ8 180 aa11.66□□□□□ -0.54
GGPS1-202ENST00000358966 SAGE2PA6NJ88 616 aa11.66□□□□□ -0.54
GGPS1-202ENST00000358966 E9PQ18 207 aa11.66□□□□□ -0.54
GGPS1-202ENST00000358966 GNB5O14775 395 aa11.66□□□□□ -0.54
GGPS1-202ENST00000358966 NDUFS6O75380 124 aaKnown RBP11.66□□□□□ -0.54
GGPS1-202ENST00000358966 PRKAR1BP31321 381 aa11.66□□□□□ -0.54
GGPS1-202ENST00000358966 CRISP1P54107 249 aa11.66□□□□□ -0.54
GGPS1-202ENST00000358966 S100A12P80511 92 aa11.66□□□□□ -0.54
GGPS1-202ENST00000358966 ALDH6A1Q02252 535 aaKnown RBP11.66□□□□□ -0.54
GGPS1-202ENST00000358966 SCRN3Q0VDG4 424 aa11.66□□□□□ -0.54
GGPS1-202ENST00000358966 EXOSC6Q5RKV6 272 aaKnown RBP11.66□□□□□ -0.54
GGPS1-202ENST00000358966 PRSS42Q7Z5A4 293 aa11.66□□□□□ -0.54
GGPS1-202ENST00000358966 PTPMT1Q8WUK0 201 aaPredicted RBP11.66□□□□□ -0.54
GGPS1-202ENST00000358966 DEDD2Q8WXF8 326 aa11.66□□□□□ -0.54
GGPS1-202ENST00000358966 NDC1Q9BTX1 674 aa11.66□□□□□ -0.54
GGPS1-202ENST00000358966 OR10A5Q9H207 317 aa11.66□□□□□ -0.54
GGPS1-202ENST00000358966 AKIRIN1Q9H9L7 192 aaPredicted RBP11.66□□□□□ -0.54
GGPS1-202ENST00000358966 IMPAD1Q9NX62 359 aa11.66□□□□□ -0.54
GGPS1-202ENST00000358966 CALML5Q9NZT1 146 aa11.66□□□□□ -0.54
GGPS1-202ENST00000358966 CIB4A0PJX0 185 aa11.66□□□□□ -0.54
GGPS1-202ENST00000358966 FAAHO00519 579 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms