RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 OR6F1Q8NGZ6 308 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 ZBTB8AQ96BR9 441 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 INPP5KQ9BT40 448 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 THAP7Q9BT49 309 aaPredicted RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 LHPPQ9H008 270 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 SOX17Q9H6I2 414 aaPredicted RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 ACSS1Q9NUB1 689 aaPredicted RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 IL37Q9NZH6 218 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 CNIH4Q9P003 139 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 ENPP5Q9UJA9 477 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 ZNF223Q9UK11 482 aaPredicted RBP6.07□□□□□ -1.44
UPF2-201ENST00000356352 VDAC3Q9Y277 283 aa6.07□□□□□ -1.44
UPF2-201ENST00000356352 IGKV6D-21A0A0A0MT36 114 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 A0A0A6YYC8 382 aaPredicted RBP6.06□□□□□ -1.44
UPF2-201ENST00000356352 NPIPB15A6NHN6 443 aaPredicted RBP6.06□□□□□ -1.44
UPF2-201ENST00000356352 METTL15A6NJ78 407 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 HIDE1A8MVS5 230 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 I3L1I5 382 aaPredicted RBP6.06□□□□□ -1.44
UPF2-201ENST00000356352 NME4O00746 187 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 GPR39O43194 453 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 GPRIN2O60269 458 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 DPM1O60762 260 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 CPMP14384 443 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 ZNF44P15621 663 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 DCTP40126 519 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 INHBCP55103 352 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 WDR5P61964 334 aaKnown RBP6.06□□□□□ -1.44
UPF2-201ENST00000356352 CDK5R2Q13319 367 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 HMGN3Q15651 99 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 ACSM3Q53FZ2 586 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 TMPRSS7Q7RTY8 843 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 MMP21Q8N119 569 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 ZNF454Q8N9F8 522 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 OR2T35Q8NGX2 323 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 NANPQ8TBE9 248 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 HAS2Q92819 552 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 KLF16Q9BXK1 252 aaPredicted RBP6.06□□□□□ -1.44
UPF2-201ENST00000356352 ULBP2Q9BZM5 246 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 PLCXD1Q9NUJ7 323 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 IL17CQ9P0M4 197 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 EBF1Q9UH73 591 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 CCDC163A0A0D9SF12 145 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 MROH6A6NGR9 719 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 G3V2L1 256 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 ARPC5O15511 151 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 CT45A6P0DMU7 189 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 CT45A5P0DMU8 189 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 CT45A7P0DMV0 189 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 CT45A8P0DMV1 189 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 CT45A9P0DMV2 189 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 ECI1P42126 302 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 PRLHRP49683 370 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 AFF3P51826 1226 aaKnown RBP6.06□□□□□ -1.44
UPF2-201ENST00000356352 SLC35A1P78382 337 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 SLC7A9P82251 487 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 PDE7AQ13946 482 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 GPR18Q14330 331 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 PGGHGQ32M88 737 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 CT45A2Q5DJT8 189 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 CT45A1Q5HYN5 189 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 DCAF12Q5T6F0 453 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 ZNF322Q6U7Q0 402 aaPredicted RBP6.06□□□□□ -1.44
UPF2-201ENST00000356352 NOXA1Q86UR1 476 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 C12orf45Q8N5I9 185 aaPredicted RBP6.06□□□□□ -1.44
UPF2-201ENST00000356352 DTX3Q8N9I9 347 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 OR7G1Q8NGA0 311 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 OR56B1Q8NGI3 324 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 CT45A3Q8NHU0 189 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 NPRL2Q8WTW4 380 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 ZNF436Q9C0F3 470 aaPredicted RBP6.06□□□□□ -1.44
UPF2-201ENST00000356352 OR51J1Q9H342 316 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 PTTG3PQ9NZH4 202 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 KCMF1Q9P0J7 381 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 INTS6Q9UL03 887 aaKnown RBP6.06□□□□□ -1.44
UPF2-201ENST00000356352 ZCWPW2A0A1B0GU75 182 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 WNT11O96014 354 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 ACPPP15309 386 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 FOSL1P15407 271 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 RAB5CP51148 216 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 BMXP51813 675 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 CLDN10P78369 228 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 IL13RA1P78552 427 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 DYRK1AQ13627 763 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 C18orf21Q32NC0 220 aaPredicted RBP6.06□□□□□ -1.44
UPF2-201ENST00000356352 SLC36A2Q495M3 483 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 LETMD1Q6P1Q0 360 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 OR4M1Q8NGD0 313 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 OR9Q2Q8NGE9 314 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 NDNFQ8TB73 568 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 ZNF384Q8TF68 577 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 ANKRD9Q96BM1 317 aaPredicted RBP6.06□□□□□ -1.44
UPF2-201ENST00000356352 ELMOD3Q96FG2 381 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 MFFQ9GZY8 342 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 IL26Q9NPH9 171 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 RPS10P5Q9NQ39 176 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 AK6Q9Y3D8 172 aaKnown RBP6.06□□□□□ -1.44
UPF2-201ENST00000356352 A0A1B0GV50 99 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 FAM155AB1AL88 458 aaPredicted RBP6.06□□□□□ -1.44
UPF2-201ENST00000356352 GABARAPH6UMI1 98 aa6.06□□□□□ -1.44
UPF2-201ENST00000356352 ARPC1BO15143 372 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms