RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 KATNB1Q9BVA0 655 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 WASH6PQ9NQA3 447 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 PLEK2Q9NYT0 353 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 SLC25A37Q9NYZ2 338 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 TEX13CA0A0J9YWL9 993 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 TGFBR2P37173 567 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 TUBA1BP68363 451 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 RUNX2Q13950 521 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 ABCA11PQ4W5N1 156 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 GLT8D1Q68CQ7 371 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 TUBA1AQ71U36 451 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 BCDIN3DQ7Z5W3 292 aaKnown RBP12.73□□□□□ -0.37
SMC6-201ENST00000351948 FOXRED2Q8IWF2 684 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 SLC35F2Q8IXU6 374 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 OR5T2Q8NGG2 359 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 TMEM9BQ9NQ34 198 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 CNOT11Q9UKZ1 510 aaKnown RBP12.73□□□□□ -0.37
SMC6-201ENST00000351948 MCTS1Q9ULC4 181 aaKnown RBP12.73□□□□□ -0.37
SMC6-201ENST00000351948 BAIAP2Q9UQB8 552 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 SIPA1L1O43166 1804 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 CD46P15529 392 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 GPX2P18283 190 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 DPP4P27487 766 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 BSGP35613 385 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 GIPRP48546 466 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 ACTA2P62736 377 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 ACTG2P63267 376 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 TUBA3CQ13748 450 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 VASNQ6EMK4 673 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 CMAHPQ9Y471 501 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 LOXL2Q9Y4K0 774 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 PMF1-BGLAPU3KQ54 211 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 BLACEA4D250 179 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 HSD17B7P56937 341 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 GNG2P59768 71 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 POU4F2Q12837 409 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 PDE7AQ13946 482 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 TIGD4Q8IY51 512 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 ATG5Q9H1Y0 275 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 ACOT8O14734 319 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 ADAM23O75077 832 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 ICAM2P13598 275 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 MPLP40238 635 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 CSNK1A1P48729 337 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 DAPP51397 102 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 GLO1Q04760 184 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 DHRS13Q6UX07 377 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 C1orf210Q8IVY1 113 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 SLC2A12Q8TD20 617 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.72□□□□□ -0.37
SMC6-201ENST00000351948 THOC3Q96J01 351 aaKnown RBP12.72□□□□□ -0.37
SMC6-201ENST00000351948 LMF1Q96S06 567 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 TESQ9UGI8 421 aaKnown RBP12.72□□□□□ -0.37
SMC6-201ENST00000351948 MMACHCQ9Y4U1 282 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 RIF1Q5UIP0 2472 aaKnown RBP12.72□□□□□ -0.37
SMC6-201ENST00000351948 SH3PXD2BA1X283 911 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 ORC5O43913 435 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 DOK2O60496 412 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 GSTT2BP0CG30 244 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 MAGEA2P43356 314 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 CAMK2DQ13557 499 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 BCL2L15Q5TBC7 163 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 AMBRA1Q9C0C7 1298 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 LYRM4Q9HD34 91 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 ZNF701Q9NV72 531 aaPredicted RBP12.72□□□□□ -0.37
SMC6-201ENST00000351948 VSX1Q9NZR4 365 aaPredicted RBP12.72□□□□□ -0.37
SMC6-201ENST00000351948 SESN1Q9Y6P5 492 aa12.72□□□□□ -0.37
SMC6-201ENST00000351948 GGT3PA6NGU5 568 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 FAM166BA8MTA8 275 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 H0YJX3 145 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 NME1P15531 152 aaKnown RBP12.71□□□□□ -0.37
SMC6-201ENST00000351948 AP2S1P53680 142 aaPredicted RBP12.71□□□□□ -0.37
SMC6-201ENST00000351948 ARPC4P59998 168 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 PGGHGQ32M88 737 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 CCDC92Q53HC0 331 aaPredicted RBP12.71□□□□□ -0.37
SMC6-201ENST00000351948 LINC01555Q8NAE3 123 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 SNIP1Q8TAD8 396 aaKnown RBP12.71□□□□□ -0.37
SMC6-201ENST00000351948 ZNF696Q9H7X3 374 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 MRPL15Q9P015 296 aaKnown RBP12.71□□□□□ -0.37
SMC6-201ENST00000351948 NXT1Q9UKK6 140 aaKnown RBP12.71□□□□□ -0.37
SMC6-201ENST00000351948 PPIL1Q9Y3C6 166 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 ZNF337Q9Y3M9 751 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 ARGFXA6NJG6 315 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 TFPTP0C1Z6 253 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 CD22P20273 847 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 DLSTP36957 453 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 MELKQ14680 651 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 ZFP69Q49AA0 526 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 TMEM201Q5SNT2 666 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 FAM199XQ6PEV8 388 aaPredicted RBP12.71□□□□□ -0.37
SMC6-201ENST00000351948 PRSS48Q7RTY5 328 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 RPS19BP1Q86WX3 136 aaKnown RBP12.71□□□□□ -0.37
SMC6-201ENST00000351948 LRRC18Q8N456 261 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 SLC35A4Q96G79 324 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 NIPSNAP1Q9BPW8 284 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 SP140LQ9H930 580 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 PRDM6Q9NQX0 595 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 CLEC1BQ9P126 229 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 TBC1D24Q9ULP9 559 aa12.71□□□□□ -0.37
SMC6-201ENST00000351948 BOKQ9UMX3 212 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms