RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 GMPPAQ96IJ6 420 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF587Q96SQ5 575 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 NPAS1Q99742 590 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 DPP7Q9UHL4 492 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CA14Q9ULX7 337 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 LOC100509620A0A075B734 347 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SFTPBP07988 381 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 COX7A2P14406 83 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 OTX2P32243 289 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 KIAA1211LQ6NV74 962 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 COLCA1Q6ZS62 124 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 KREMEN2Q8NCW0 462 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 TP53RKQ96S44 253 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ZBTB20Q9HC78 741 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SLC22A14Q9Y267 594 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 PQBP1O60828 265 aaKnown RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ADRB3P13945 408 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 AK4P27144 223 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 KIR3DL1P43629 444 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 GPLD1P80108 840 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SLC25A30Q5SVS4 291 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 DENND1CQ8IV53 801 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 RPL10LQ96L21 214 aaKnown RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 PEBP4Q96S96 227 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 USP31Q70CQ4 1352 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 TEX50A0A1B0GTY4 177 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF670-ZNF695F2Z2N8 137 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 TLX3O43711 291 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 GLAP06280 429 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SRMP19623 302 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CXCR1P25024 350 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 RPL29P47914 159 aaKnown RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CHIT1Q13231 466 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SNRNP35Q16560 246 aaKnown RBP3.55□□□□□ -1.84
SYNE2-202ENST00000344113 GPRIN1Q7Z2K8 1008 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 FRZBQ92765 325 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 PPCDCQ96CD2 204 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CXorf58Q96LI9 332 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ULBP3Q9BZM4 244 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 CTDSP1Q9GZU7 261 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 ZFP30Q9Y2G7 519 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM14AQ9Y6G1 99 aa3.55□□□□□ -1.84
SYNE2-202ENST00000344113 SMAD4Q13485 552 aaKnown RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 TUSC5Q8IXB3 177 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ZBTB44Q8NCP5 570 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 OR10A7Q8NGE5 316 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 OR5AK2Q8NH90 309 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 OR2A14Q96R47 310 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CHRDL1Q9BU40 450 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 KLHL13Q9P2N7 655 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 WDR45Q9Y484 360 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 H7C1C5 153 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 POU3F3P20264 500 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 KCNJ1P48048 391 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 KLF1Q13351 362 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 NKX1-1Q15270 411 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 LEG1Q6P5S2 330 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CLEC10AQ8IUN9 316 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 UHRF2Q96PU4 802 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CSF3RQ99062 836 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 NIF3L1Q9GZT8 377 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 PEF1Q9UBV8 284 aaKnown RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CARHSP1Q9Y2V2 147 aaKnown RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 RNF11Q9Y3C5 154 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 SLIT3O75094 1523 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 EPHA2P29317 976 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 FRKP42685 505 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 DNASE1L1P49184 302 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 B4GALNT1Q00973 533 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CAMK2GQ13555 558 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 DUOXA1Q1HG43 343 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 LIPNQ5VXI9 398 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 FAHD2BQ6P2I3 314 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 BTNL8Q6UX41 500 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 PHOSPHO2Q8TCD6 241 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 WDR34Q96EX3 536 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 FAHD2AQ96GK7 314 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 OR10C1Q96KK4 312 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 DUSP26Q9BV47 211 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 MYOZ2Q9NPC6 264 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 SCML2Q9UQR0 700 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 USP3Q9Y6I4 520 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CNTNAP2Q9UHC6 1331 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 A0A1B0GUH1 482 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 B4DXG7 233 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 TRUB2O95900 331 aaKnown RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 PLAG1Q6DJT9 500 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 KCNG3Q8TAE7 436 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ACTL9Q8TC94 416 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 GAL3ST4Q96RP7 486 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 MIOSQ9NXC5 875 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 NENFQ9UMX5 172 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CLEC18AA5D8T8 446 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 RNF224P0DH78 156 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 MYOGP15173 224 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 PAFAH1B2P68402 229 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 SLC51AQ86UW1 340 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ZDHHC21Q8IVQ6 265 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CLEC18CQ8NCF0 446 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ZFP90Q8TF47 636 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms