RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 NAAAQ02083 359 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 TGM3Q08188 693 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 EFR3AQ14156 821 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 EXOSC7Q15024 291 aaKnown RBP9.34□□□□□ -0.91
ATXN3-201ENST00000340660 C9orf135Q5VTT2 229 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 APTXQ7Z2E3 356 aaKnown RBP9.34□□□□□ -0.91
ATXN3-201ENST00000340660 THOC6Q86W42 341 aaKnown RBP9.34□□□□□ -0.91
ATXN3-201ENST00000340660 OR10S1Q8NGN2 331 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 DUSP19Q8WTR2 217 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 GPR21Q99679 349 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 SEC61A2Q9H9S3 476 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 CHRAC1Q9NRG0 131 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 TREX1Q9NSU2 369 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 FLRT3Q9NZU0 649 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 CTTNBP2NLQ9P2B4 639 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 KLHL9Q9P2J3 617 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 PRODH2Q9UF12 536 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 ZKSCAN5Q9Y2L8 839 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 DHRS7Q9Y394 339 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 hCG_1818297A0A087WSY0 165 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 PDLIM1O00151 329 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 CDC14BO60729 498 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 GSTM2P28161 218 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 HPDP32754 393 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-201ENST00000340660 SFTPDP35247 375 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 PPICP45877 212 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 SEC24CP53992 1094 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 KLHL30Q0D2K2 578 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 PARP6Q2NL67 630 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 ASTE1Q2TB18 679 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-201ENST00000340660 LARP4Q71RC2 724 aaKnown RBP eCLIP9.33□□□□□ -0.92
ATXN3-201ENST00000340660 GPR180Q86V85 440 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 SLC43A2Q8N370 569 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 C17orf78Q8N4C9 275 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 MLKLQ8NB16 471 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 OR4F15Q8NGB8 312 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 UHMK1Q8TAS1 419 aaKnown RBP9.33□□□□□ -0.92
ATXN3-201ENST00000340660 EFHD2Q96C19 240 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-201ENST00000340660 FBXL8Q96CD0 374 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 TRIM44Q96DX7 344 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-201ENST00000340660 RNF145Q96MT1 663 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 ASB6Q9NWX5 421 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 MS4A12Q9NXJ0 267 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 CGGBP1Q9UFW8 167 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-201ENST00000340660 SLC22A14Q9Y267 594 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 PLLPQ9Y342 182 aa9.33□□□□□ -0.92
ATXN3-201ENST00000340660 ANKDD1BA6NHY2 528 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 M0R233 179 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 SYNGR3O43761 229 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 FADS1O60427 444 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 FOXH1O75593 365 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 IGHMP01871 453 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 C1GALT1C1LP0DN25 315 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 RAD52P43351 418 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 ALDH3B1P43353 468 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 SLURP1P55000 103 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 KRTAP10-2P60368 255 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 SLC7A5Q01650 507 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 PAX8Q06710 450 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 MGAT2Q10469 447 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 ODF2Q5BJF6 829 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 LRRC38Q5VT99 294 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 GSPT2Q8IYD1 628 aaKnown RBP9.32□□□□□ -0.92
ATXN3-201ENST00000340660 C1orf174Q8IYL3 243 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 OR4F17Q8NGA8 305 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 SSMEM1Q8WWF3 244 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 ZG16BQ96DA0 208 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 ANKRD27Q96NW4 1050 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 OR4F4Q96R69 305 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 ERGIC2Q96RQ1 377 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 FAM118BQ9BPY3 351 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 LRRC1Q9BTT6 524 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 COQ10BQ9H8M1 238 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 MALT1Q9UDY8 824 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 BCAP29Q9UHQ4 241 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 CFL2Q9Y281 166 aa9.32□□□□□ -0.92
ATXN3-201ENST00000340660 ZNF724A8MTY0 619 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 PHGDHO43175 533 aaKnown RBP9.31□□□□□ -0.92
ATXN3-201ENST00000340660 SH3BGRLO75368 114 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 IGHV4-59P01825 116 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 GBAP04062 536 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 CECR9P0C854 216 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 IL12BP29460 328 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 CD80P33681 288 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 SSR2P43308 183 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 PRPS1P60891 318 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 BST1Q10588 318 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 DPY19L1Q2PZI1 675 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 OTUD3Q5T2D3 398 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-201ENST00000340660 CENPUQ71F23 418 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 GALNT5Q7Z7M9 940 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 SDCCAG8Q86SQ7 713 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-201ENST00000340660 LINC00523Q86TU6 105 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 SDR9C7Q8NEX9 313 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 OR52E4Q8NGH9 312 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 POC1BQ8TC44 478 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 EEF1AKMT1Q8WVE0 214 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 UPRTQ96BW1 309 aa9.31□□□□□ -0.92
ATXN3-201ENST00000340660 FAM71F1Q96KD3 344 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-201ENST00000340660 MRGPRX4Q96LA9 322 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms