RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 SELENBP1Q13228 472 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 TP53BP2Q13625 1128 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 PPA1Q15181 289 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 TOMM34Q15785 309 aaPredicted RBP13.84□□□□□ -0.19
LINC01116-202ENST00000339037 ARL13AQ5H913 290 aaPredicted RBP13.84□□□□□ -0.19
LINC01116-202ENST00000339037 DCST2Q5T1A1 773 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.84□□□□□ -0.19
LINC01116-202ENST00000339037 CDC73Q6P1J9 531 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 ZNF614Q8N883 585 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 TCP10LQ8TDR4 215 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 GPR119Q8TDV5 335 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 MUCL1Q96DR8 90 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 PSD2Q9BQI7 771 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 TRAF4Q9BUZ4 470 aaPredicted RBP13.84□□□□□ -0.19
LINC01116-202ENST00000339037 GRIP2Q9C0E4 1043 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 CXorf36Q9H7Y0 433 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 CISD1Q9NZ45 108 aaKnown RBP13.84□□□□□ -0.19
LINC01116-202ENST00000339037 GDF2Q9UK05 429 aaPredicted RBP13.84□□□□□ -0.19
LINC01116-202ENST00000339037 ING1Q9UK53 422 aaPredicted RBP13.84□□□□□ -0.19
LINC01116-202ENST00000339037 FAF1Q9UNN5 650 aaPredicted RBP13.84□□□□□ -0.19
LINC01116-202ENST00000339037 TRAF6Q9Y4K3 522 aa13.84□□□□□ -0.19
LINC01116-202ENST00000339037 SCAMP2O15127 329 aaKnown RBP13.83□□□□□ -0.2
LINC01116-202ENST00000339037 RAMP1O60894 148 aa13.83□□□□□ -0.2
LINC01116-202ENST00000339037 FGF4P08620 206 aa13.83□□□□□ -0.2
LINC01116-202ENST00000339037 KRT16P08779 473 aa13.83□□□□□ -0.2
LINC01116-202ENST00000339037 BCKDHAP12694 445 aa13.83□□□□□ -0.2
LINC01116-202ENST00000339037 CREB1P16220 341 aa13.83□□□□□ -0.2
LINC01116-202ENST00000339037 CCR4P51679 360 aa13.83□□□□□ -0.2
LINC01116-202ENST00000339037 RASGEF1BQ0VAM2 473 aa13.83□□□□□ -0.2
LINC01116-202ENST00000339037 NDUFAF6Q330K2 333 aa13.83□□□□□ -0.2
LINC01116-202ENST00000339037 CHRFAM7AQ494W8 412 aa13.83□□□□□ -0.2
LINC01116-202ENST00000339037 SPDYE7PQ495Y7 208 aa13.83□□□□□ -0.2
LINC01116-202ENST00000339037 SSX8Q7RTT4 187 aa13.83□□□□□ -0.2
LINC01116-202ENST00000339037 DTX2Q86UW9 622 aa13.83□□□□□ -0.2
LINC01116-202ENST00000339037 TMCO5AQ8N6Q1 288 aa13.83□□□□□ -0.2
LINC01116-202ENST00000339037 OR56A1Q8NGH5 318 aa13.83□□□□□ -0.2
LINC01116-202ENST00000339037 ADAMTS15Q8TE58 950 aa13.83□□□□□ -0.2
LINC01116-202ENST00000339037 AENQ8WTP8 325 aaKnown RBP13.83□□□□□ -0.2
LINC01116-202ENST00000339037 ACTRT3Q9BYD9 372 aa13.83□□□□□ -0.2
LINC01116-202ENST00000339037 PRSS50Q9UI38 385 aa13.83□□□□□ -0.2
LINC01116-202ENST00000339037 DTNAQ9Y4J8 743 aa13.83□□□□□ -0.2
LINC01116-202ENST00000339037 ALPK2Q86TB3 2170 aa13.83□□□□□ -0.2
LINC01116-202ENST00000339037 A0A1W2PNR3 127 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 A8MV72 311 aaPredicted RBP13.82□□□□□ -0.2
LINC01116-202ENST00000339037 TMEM114B3SHH9 223 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 SHISA9B4DS77 424 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 ABCD4O14678 606 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 CD8AP01732 235 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 GGT1P19440 569 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 RPL3P39023 403 aaKnown RBP13.82□□□□□ -0.2
LINC01116-202ENST00000339037 CCT3P49368 545 aaKnown RBP13.82□□□□□ -0.2
LINC01116-202ENST00000339037 ATP12AP54707 1039 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 C21orf58P58505 322 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 IFFO1Q0D2I5 559 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 NRF1Q16656 503 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 XKR7Q5GH72 579 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 C3orf33Q6P1S2 294 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 PHC2Q8IXK0 858 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 TOR1AIP2Q8NFQ8 470 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 OR7A2PQ8NGA2 310 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 OR5W2Q8NH69 310 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 RFWD2Q8NHY2 731 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 ARL8AQ96BM9 186 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 C3orf30Q96M34 536 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 RHNO1Q9BSD3 238 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 ATP6V1HQ9UI12 483 aa13.82□□□□□ -0.2
LINC01116-202ENST00000339037 C9JVG2 144 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 NPIPB9F8W1W9 429 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 ETV2O00321 342 aaPredicted RBP13.81□□□□□ -0.2
LINC01116-202ENST00000339037 SMAD9O15198 467 aaKnown RBP13.81□□□□□ -0.2
LINC01116-202ENST00000339037 ZNF264O43296 627 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 SSX4O60224 188 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 CYTIPO60759 359 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 SKAP2O75563 359 aaPredicted RBP13.81□□□□□ -0.2
LINC01116-202ENST00000339037 LAMP1P11279 417 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 UBL4AP11441 157 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 COX5AP20674 150 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 EDNRAP25101 427 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 MAPK1P28482 360 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 NUDT6P53370 316 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 CBFBQ13951 182 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 PTGR1Q14914 329 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 QPRTQ15274 297 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 SLC25A53Q5H9E4 307 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 TIMM23BQ5SRD1 257 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 AGAP6Q5VW22 663 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.81□□□□□ -0.2
LINC01116-202ENST00000339037 GALNT5Q7Z7M9 940 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 P2RY8Q86VZ1 359 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 ZNF100Q8IYN0 542 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 PSMA8Q8TAA3 256 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 TMEM158Q8WZ71 300 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 OR5P2Q8WZ92 322 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 ZNF775Q96BV0 537 aaPredicted RBP13.81□□□□□ -0.2
LINC01116-202ENST00000339037 ZNF524Q96C55 264 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 RADILQ96JH8 1075 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 OR5B2Q96R09 309 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 ZNF300Q96RE9 604 aaPredicted RBP13.81□□□□□ -0.2
LINC01116-202ENST00000339037 C1orf50Q9BV19 199 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 EML4Q9HC35 981 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms