RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 NLGN4YQ8NFZ3 816 aaPredicted RBP13.42□□□□□ -0.26
TPM3-206ENST00000330188 OR4C6Q8NH72 309 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 RBM18Q96H35 190 aaKnown RBP13.42□□□□□ -0.26
TPM3-206ENST00000330188 SPACA7Q96KW9 195 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 MAP3K3Q99759 626 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 GDF15Q99988 308 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 PRTFDC1Q9NRG1 225 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 POU2F3Q9UKI9 436 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 BAIAP2Q9UQB8 552 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 RIIAD1A6NNX1 92 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 NPIPB9F8W1W9 429 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 SRPX2O60687 465 aaPredicted RBP13.42□□□□□ -0.26
TPM3-206ENST00000330188 MRPL3P09001 348 aaKnown RBP13.42□□□□□ -0.26
TPM3-206ENST00000330188 SBK2P0C263 348 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 ZNF3P17036 446 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 HK1P19367 917 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 BTG2P78543 158 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 CRYZQ08257 329 aaKnown RBP13.42□□□□□ -0.26
TPM3-206ENST00000330188 ZNF267Q14586 743 aaPredicted RBP13.42□□□□□ -0.26
TPM3-206ENST00000330188 CNIH2Q6PI25 160 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 FAM160A2Q8N612 972 aaPredicted RBP13.42□□□□□ -0.26
TPM3-206ENST00000330188 CYB561A3Q8NBI2 242 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 SENP5Q96HI0 755 aaPredicted RBP13.42□□□□□ -0.26
TPM3-206ENST00000330188 HOXD1Q9GZZ0 328 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 SLC22A4Q9H015 551 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 ADGRL4Q9HBW9 690 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 TRIM36Q9NQ86 728 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 FBXL4Q9UKA2 621 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 MRPS33Q9Y291 106 aaKnown RBP13.42□□□□□ -0.26
TPM3-206ENST00000330188 THADAQ6YHU6 1953 aa13.41□□□□□ -0.26
TPM3-206ENST00000330188 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.41□□□□□ -0.26
TPM3-206ENST00000330188 PEPDP12955 493 aa13.41□□□□□ -0.26
TPM3-206ENST00000330188 APEX1P27695 318 aaKnown RBP13.41□□□□□ -0.26
TPM3-206ENST00000330188 SLC6A6P31641 620 aa13.41□□□□□ -0.26
TPM3-206ENST00000330188 NUDT1P36639 197 aa13.41□□□□□ -0.26
TPM3-206ENST00000330188 GPR3P46089 330 aa13.41□□□□□ -0.26
TPM3-206ENST00000330188 SLC16A1P53985 500 aa13.41□□□□□ -0.26
TPM3-206ENST00000330188 SKP1P63208 163 aa13.41□□□□□ -0.26
TPM3-206ENST00000330188 COL19A1Q14993 1142 aa13.41□□□□□ -0.26
TPM3-206ENST00000330188 ZNF544Q6NX49 715 aa13.41□□□□□ -0.26
TPM3-206ENST00000330188 KIRREL2Q6UWL6 708 aa13.41□□□□□ -0.26
TPM3-206ENST00000330188 RTL4Q6ZR62 310 aa13.41□□□□□ -0.26
TPM3-206ENST00000330188 ZNF550Q7Z398 422 aa13.41□□□□□ -0.26
TPM3-206ENST00000330188 RAB43Q86YS6 212 aa13.41□□□□□ -0.26
TPM3-206ENST00000330188 RLN3Q8WXF3 142 aa13.41□□□□□ -0.26
TPM3-206ENST00000330188 SLC35B4Q969S0 331 aa13.41□□□□□ -0.26
TPM3-206ENST00000330188 DGAT2Q96PD7 388 aa13.41□□□□□ -0.26
TPM3-206ENST00000330188 C11orf54Q9H0W9 315 aaPredicted RBP13.41□□□□□ -0.26
TPM3-206ENST00000330188 PPP1R3EQ9H7J1 279 aa13.41□□□□□ -0.26
TPM3-206ENST00000330188 BLACEA4D250 179 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 OR2W5A6NFC9 320 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 E9PI62 339 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 PRAMEF2O60811 474 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 NSA2O95478 260 aaKnown RBP13.4□□□□□ -0.26
TPM3-206ENST00000330188 CT45A8P0DMV1 189 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 CT45A9P0DMV2 189 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 CFL1P23528 166 aaKnown RBP13.4□□□□□ -0.26
TPM3-206ENST00000330188 CAPZBP47756 277 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 MTNR1BP49286 362 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 ATP12AP54707 1039 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 DAB2P98082 770 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 ZNF85Q03923 595 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 NNATQ16517 81 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 CT45A2Q5DJT8 189 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 CADM2Q8N3J6 435 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 ARL14Q8N4G2 192 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 OR6C4Q8NGE1 309 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 OR5W2Q8NH69 310 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 EFHD2Q96C19 240 aaPredicted RBP13.4□□□□□ -0.26
TPM3-206ENST00000330188 TCTN2Q96GX1 697 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 AHCYL2Q96HN2 611 aaKnown RBP13.4□□□□□ -0.26
TPM3-206ENST00000330188 NDC1Q9BTX1 674 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 KCNN2Q9H2S1 579 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 Q9N2J8 555 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 HAO2Q9NYQ3 351 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 ZMIZ1Q9ULJ6 1067 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 ERVK-19Q9WJR5 959 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 SPTBP11277 2137 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 CACNA1IQ9P0X4 2223 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 PLA2G10O15496 165 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 CCNKO75909 580 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 MT-ND5P03915 603 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 PROS1P07225 676 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 FASLGP48023 281 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 GABRA4P48169 554 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 EVX1P49640 407 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 P2RY14Q15391 338 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 ZSWIM7Q19AV6 140 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 ARHGAP11AQ6P4F7 1023 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 MZT2AQ6P582 158 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 ULK3Q6PHR2 472 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 METAP1DQ6UB28 335 aaPredicted RBP13.4□□□□□ -0.26
TPM3-206ENST00000330188 NR2C2APQ86WQ0 139 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 SLC43A2Q8N370 569 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 C16orf52Q8NHV5 167 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 ADAMTS18Q8TE60 1221 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 SMPDL3BQ92485 455 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 MSANTD3Q96H12 275 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 ZNF285Q96NJ3 590 aa13.4□□□□□ -0.26
TPM3-206ENST00000330188 MMP28Q9H239 520 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms