RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 ZNF613Q6PF04 617 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 C19orf48Q6RUI8 117 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 PRR22Q8IZ63 422 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 IL4I1Q96RQ9 567 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 C14orf105Q9NVL8 296 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 COPS7AQ9UBW8 275 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 KLF4O43474 513 aa18.63■□□□□ 0.57
RIPPLY3-201ENST00000329553 ADRA2AP08913 450 aa18.63■□□□□ 0.57
RIPPLY3-201ENST00000329553 ZNF28P17035 718 aa18.63■□□□□ 0.57
RIPPLY3-201ENST00000329553 DCAF7P61962 342 aa18.63■□□□□ 0.57
RIPPLY3-201ENST00000329553 GINS1Q14691 196 aa18.63■□□□□ 0.57
RIPPLY3-201ENST00000329553 SOWAHCQ53LP3 525 aaPredicted RBP18.63■□□□□ 0.57
RIPPLY3-201ENST00000329553 ACSM5Q6NUN0 579 aa18.63■□□□□ 0.57
RIPPLY3-201ENST00000329553 ANKRD37Q7Z713 158 aa18.63■□□□□ 0.57
RIPPLY3-201ENST00000329553 CMIPQ8IY22 773 aa18.63■□□□□ 0.57
RIPPLY3-201ENST00000329553 CENPOQ9BU64 300 aa18.63■□□□□ 0.57
RIPPLY3-201ENST00000329553 C6orf62Q9GZU0 229 aaPredicted RBP18.63■□□□□ 0.57
RIPPLY3-201ENST00000329553 WWTR1Q9GZV5 400 aa18.63■□□□□ 0.57
RIPPLY3-201ENST00000329553 RNF167Q9H6Y7 350 aa18.63■□□□□ 0.57
RIPPLY3-201ENST00000329553 CPNE5Q9HCH3 593 aa18.63■□□□□ 0.57
RIPPLY3-201ENST00000329553 UBQLN4Q9NRR5 601 aa18.63■□□□□ 0.57
RIPPLY3-201ENST00000329553 LOC100506127A0A0U1RQW1 187 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 FLRT2O43155 660 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 ALOX12BO75342 701 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 CSTAP01040 98 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 EIF2B2P49770 351 aaKnown RBP18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 NR0B1P51843 470 aaKnown RBP18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 CDK5Q00535 292 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 ZSWIM7Q19AV6 140 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 HLA-DQA1Q5Y7H0 255 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 DESI1Q6ICB0 168 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 CASP12Q6UXS9 341 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 RASSF6Q6ZTQ3 369 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 POGLUT1Q8NBL1 392 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 GRHL3Q8TE85 626 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 RXFP3Q9NSD7 469 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 ZNF223Q9UK11 482 aaPredicted RBP18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 A0A0B4J2E0 115 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 A0A1B0GWA3 101 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 A0A1B0GX12 115 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 FPR3P25089 353 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 SLC15A1P46059 708 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 EMP2P54851 167 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 ZNF45Q02386 682 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 PRKCDQ05655 676 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 ZNF550Q7Z398 422 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 TMEM239Q8WW34 195 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 SLC35B4Q969S0 331 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 ADOQ96SZ5 270 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 HOXD1Q9GZZ0 328 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 ABCB10Q9NRK6 738 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 TAS2R16Q9NYV7 291 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 RALGAPA1Q6GYQ0 2036 aa18.62■□□□□ 0.57
RIPPLY3-201ENST00000329553 SYNDIG1LA6NDD5 238 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 CDC42EP2O14613 210 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 APOOLQ6UXV4 268 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 SLC29A4Q7RTT9 530 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 RNF113BQ8IZP6 322 aaKnown RBP18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 LSMEM1Q8N8F7 131 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 GATSQ8NAP1 163 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 OR8D4Q8NGM9 314 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 PFN4Q8NHR9 129 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 SPSB2Q99619 263 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 TRIM2Q9C040 744 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 TVP23BQ9NYZ1 205 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 HEATR5AQ86XA9 2040 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 CPNE3O75131 537 aaKnown RBP18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 REM1O75628 298 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 UTS2O95399 124 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 PIPP12273 146 aaPredicted RBP18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 STAT5AP42229 794 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 SNRPGP62308 76 aaKnown RBP18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 MC2RQ01718 297 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 STEAP3Q658P3 488 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 TCEANCQ8N8B7 351 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 PMEPA1Q969W9 287 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 OR5M11Q96RB7 305 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 CHCHD6Q9BRQ6 235 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 C20orf141Q9NUB4 165 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 CLN6Q9NWW5 311 aa18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 MRTO4Q9UKD2 239 aaKnown RBP18.61■□□□□ 0.57
RIPPLY3-201ENST00000329553 FAM86C2PA6NEL3 165 aa18.6■□□□□ 0.57
RIPPLY3-201ENST00000329553 OR6C76A6NM76 312 aa18.6■□□□□ 0.57
RIPPLY3-201ENST00000329553 CDX4O14627 284 aaPredicted RBP18.6■□□□□ 0.57
RIPPLY3-201ENST00000329553 TO15178 435 aa18.6■□□□□ 0.57
RIPPLY3-201ENST00000329553 HSMCR30P0CW71 290 aa18.6■□□□□ 0.57
RIPPLY3-201ENST00000329553 SF3A2Q15428 464 aaKnown RBP18.6■□□□□ 0.57
RIPPLY3-201ENST00000329553 CD226Q15762 336 aa18.6■□□□□ 0.57
RIPPLY3-201ENST00000329553 KIF26BQ2KJY2 2108 aa18.6■□□□□ 0.57
RIPPLY3-201ENST00000329553 FNDC7Q5VTL7 733 aa18.6■□□□□ 0.57
RIPPLY3-201ENST00000329553 PLAG1Q6DJT9 500 aa18.6■□□□□ 0.57
RIPPLY3-201ENST00000329553 ATCAYQ86WG3 371 aa18.6■□□□□ 0.57
RIPPLY3-201ENST00000329553 NFAM1Q8NET5 270 aaPredicted RBP18.6■□□□□ 0.57
RIPPLY3-201ENST00000329553 METTL21AQ8WXB1 218 aa18.6■□□□□ 0.57
RIPPLY3-201ENST00000329553 MGLLQ99685 303 aa18.6■□□□□ 0.57
RIPPLY3-201ENST00000329553 SLC25A19Q9HC21 320 aa18.6■□□□□ 0.57
RIPPLY3-201ENST00000329553 ZNF229Q9UJW7 825 aa18.6■□□□□ 0.57
RIPPLY3-201ENST00000329553 SLC35A3Q9Y2D2 325 aa18.6■□□□□ 0.57
RIPPLY3-201ENST00000329553 TBX1O43435 398 aa18.59■□□□□ 0.57
RIPPLY3-201ENST00000329553 CHP2O43745 196 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms