RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 RNF217Q8TC41 542 aa16.34■□□□□ 0.21
RAB39A-201ENST00000320578 TMEM43Q9BTV4 400 aa16.34■□□□□ 0.21
RAB39A-201ENST00000320578 ULBP3Q9BZM4 244 aa16.34■□□□□ 0.21
RAB39A-201ENST00000320578 OR52D1Q9H346 318 aa16.34■□□□□ 0.21
RAB39A-201ENST00000320578 TMEM9BQ9NQ34 198 aa16.34■□□□□ 0.21
RAB39A-201ENST00000320578 SIGLEC7Q9Y286 467 aa16.34■□□□□ 0.21
RAB39A-201ENST00000320578 NPFFR2Q9Y5X5 522 aa16.34■□□□□ 0.21
RAB39A-201ENST00000320578 COL27A1Q8IZC6 1860 aaPredicted RBP16.34■□□□□ 0.21
RAB39A-201ENST00000320578 KDM4EB2RXH2 506 aaPredicted RBP16.33■□□□□ 0.21
RAB39A-201ENST00000320578 AGRPO00253 132 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 SURF4O15260 269 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 PRODHO43272 600 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 NOL3O60936 208 aaKnown RBP16.33■□□□□ 0.21
RAB39A-201ENST00000320578 STSP08842 583 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 C21orf33P30042 268 aaPredicted RBP16.33■□□□□ 0.21
RAB39A-201ENST00000320578 MAP2K4P45985 399 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 NDUFAF6Q330K2 333 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 SMARCD3Q6STE5 483 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 ATG4DQ86TL0 474 aaPredicted RBP16.33■□□□□ 0.21
RAB39A-201ENST00000320578 ANKRD13BQ86YJ7 626 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 LNX2Q8N448 690 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 FANK1Q8TC84 345 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 MR1Q95460 341 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 C12orf43Q96C57 262 aaKnown RBP16.33■□□□□ 0.21
RAB39A-201ENST00000320578 LIN37Q96GY3 246 aaPredicted RBP16.33■□□□□ 0.21
RAB39A-201ENST00000320578 LRR1Q96L50 414 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 SAMD8Q96LT4 415 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 ZNF582Q96NG8 517 aaPredicted RBP16.33■□□□□ 0.21
RAB39A-201ENST00000320578 UBQLN3Q9H347 655 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 AKIRIN1Q9H9L7 192 aaPredicted RBP16.33■□□□□ 0.21
RAB39A-201ENST00000320578 HHATLQ9HCP6 504 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 ATP13A2Q9NQ11 1180 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 CARD8Q9Y2G2 431 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 LOXL2Q9Y4K0 774 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 PCDHGA1Q9Y5H4 931 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 VCANP13611 3396 aa16.33■□□□□ 0.21
RAB39A-201ENST00000320578 A0A1W2PQ72 361 aa16.33■□□□□ 0.2
RAB39A-201ENST00000320578 CDC14CA4D256 554 aa16.33■□□□□ 0.2
RAB39A-201ENST00000320578 NDUFB5O43674 189 aa16.33■□□□□ 0.2
RAB39A-201ENST00000320578 RFPL3O75679 317 aa16.33■□□□□ 0.2
RAB39A-201ENST00000320578 FADS2O95864 444 aaKnown RBP16.33■□□□□ 0.2
RAB39A-201ENST00000320578 IGHEP01854 428 aa16.33■□□□□ 0.2
RAB39A-201ENST00000320578 DBTP11182 482 aaKnown RBP16.33■□□□□ 0.2
RAB39A-201ENST00000320578 FOXL2P58012 376 aa16.33■□□□□ 0.2
RAB39A-201ENST00000320578 FXYD6P3P58550 94 aa16.33■□□□□ 0.2
RAB39A-201ENST00000320578 SF3A2Q15428 464 aaKnown RBP16.33■□□□□ 0.2
RAB39A-201ENST00000320578 SUMF1Q8NBK3 374 aa16.33■□□□□ 0.2
RAB39A-201ENST00000320578 RNF138Q8WVD3 245 aa16.33■□□□□ 0.2
RAB39A-201ENST00000320578 LIPHQ8WWY8 451 aa16.33■□□□□ 0.2
RAB39A-201ENST00000320578 TTC9Q92623 222 aa16.33■□□□□ 0.2
RAB39A-201ENST00000320578 DDA1Q9BW61 102 aa16.33■□□□□ 0.2
RAB39A-201ENST00000320578 TBL1XR1Q9BZK7 514 aa16.33■□□□□ 0.2
RAB39A-201ENST00000320578 ADAM19Q9H013 955 aa16.33■□□□□ 0.2
RAB39A-201ENST00000320578 FN3KQ9H479 309 aa16.33■□□□□ 0.2
RAB39A-201ENST00000320578 GPN2Q9H9Y4 310 aaPredicted RBP16.33■□□□□ 0.2
RAB39A-201ENST00000320578 DNAJC27Q9NZQ0 273 aa16.33■□□□□ 0.2
RAB39A-201ENST00000320578 BHLHE40O14503 412 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 OIP5O43482 229 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 GDF9O60383 454 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 EVI2BP34910 448 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 SLC1A3P43003 542 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 ZNF91Q05481 1191 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 LSAMPQ13449 338 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 KLHL22Q53GT1 634 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 CBLN3Q6UW01 205 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 RTL4Q6ZR62 310 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 SLC15A4Q8N697 577 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 OR2Y1Q8NGV0 311 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 RFKQ969G6 155 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 YIPF6Q96EC8 236 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 RNF31Q96EP0 1072 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 SGTBQ96EQ0 304 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 TMEM80Q96HE8 168 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 TAAR9Q96RI9 348 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 EDEM2Q9BV94 578 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 RACGAP1Q9H0H5 632 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 ZNF700Q9H0M5 742 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.32■□□□□ 0.2
RAB39A-201ENST00000320578 PCDHGB6Q9Y5F9 930 aa16.32■□□□□ 0.2
RAB39A-201ENST00000320578 TRBV11-1A0A0K0K1C0 115 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 TMEM200CA6NKL6 621 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 H3BMQ9 156 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 KLF7O75840 302 aaPredicted RBP16.31■□□□□ 0.2
RAB39A-201ENST00000320578 NADKO95544 446 aaPredicted RBP16.31■□□□□ 0.2
RAB39A-201ENST00000320578 SAGP10523 405 aaPredicted RBP16.31■□□□□ 0.2
RAB39A-201ENST00000320578 INSM1Q01101 510 aaPredicted RBP16.31■□□□□ 0.2
RAB39A-201ENST00000320578 CLEC12AQ5QGZ9 265 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 AADACL4Q5VUY2 407 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 SLC30A6Q6NXT4 461 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 GATSQ8NAP1 163 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 OR5W2Q8NH69 310 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 ELP5Q8TE02 316 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 TMCO6Q96DC7 493 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 ARSGQ96EG1 525 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 PLEKHA8Q96JA3 519 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 COG8Q96MW5 612 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 ENPP5Q9UJA9 477 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 ENO4A6NNW6 628 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 M0R3G1 203 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 KPNA4O00629 521 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms