RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 SPATA2Q9UM82 520 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 RIIAD1A6NNX1 92 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 G3V3Q6 166 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 PTP4A3O75365 173 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 WNT1P04628 370 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 HNRNPA1P09651 372 aaKnown RBP eCLIP17.67■□□□□ 0.423e-6■□□□□ 10.5
RTN4-201ENST00000317610 CLUP10909 449 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 NT5EP21589 574 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 CMPK1P30085 196 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 BMP8BP34820 402 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 DRD3P35462 400 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 SLC16A1P53985 500 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 ZP1P60852 638 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 KRT33BQ14525 404 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 GPR68Q15743 365 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 GRK1Q15835 563 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 RPE65Q16518 533 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 MTSS1LQ765P7 747 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 SSX6Q7RTT6 188 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 BMP8AQ7Z5Y6 402 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 FAM98AQ8NCA5 519 aaKnown RBP17.67■□□□□ 0.42
RTN4-201ENST00000317610 PEX11GQ96HA9 241 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 CMTM3Q96MX0 182 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 DPCDQ9BVM2 203 aaPredicted RBP17.67■□□□□ 0.42
RTN4-201ENST00000317610 BAIAP2Q9UQB8 552 aa17.67■□□□□ 0.42
RTN4-201ENST00000317610 OTOL1A6NHN0 477 aaPredicted RBP17.66■□□□□ 0.42
RTN4-201ENST00000317610 OR52A4PA6NMU1 304 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 MT-ND4P03905 459 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 GKN3PP0CG01 181 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 NID1P14543 1247 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 PYCR1P32322 319 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 PRMT2P55345 433 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 POU4F2Q12837 409 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 SNTB2Q13425 540 aaKnown RBP17.66■□□□□ 0.42
RTN4-201ENST00000317610 CRMP1Q14194 572 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 FGFBP1Q14512 234 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 IRF4Q15306 451 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 POU4F3Q15319 338 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 RNASE12Q5GAN4 147 aaKnown RBP17.66■□□□□ 0.42
RTN4-201ENST00000317610 MRPL2Q5T653 305 aaKnown RBP17.66■□□□□ 0.42
RTN4-201ENST00000317610 HDDC2Q7Z4H3 204 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 CDK20Q8IZL9 346 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 PIAS4Q8N2W9 510 aaPredicted RBP17.66■□□□□ 0.42
RTN4-201ENST00000317610 SUSD6Q92537 303 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 CLEC4MQ9H2X3 399 aaPredicted RBP17.66■□□□□ 0.42
RTN4-201ENST00000317610 RABL2AQ9UBK7 228 aaPredicted RBP17.66■□□□□ 0.42
RTN4-201ENST00000317610 UBQLN2Q9UHD9 624 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 RABL2BQ9UNT1 228 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 A0A0B4J203 849 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 FLRT2O43155 660 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 ZNF749O43361 778 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 STX11O75558 287 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 UCHL1P09936 223 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 TYRP1P17643 537 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 ZNF81P51508 661 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 AMZ1Q400G9 498 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 CDONQ4KMG0 1287 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 OVCH1Q7RTY7 1134 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 VN1R4Q7Z5H5 301 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 COMMD7Q86VX2 200 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 SIX5Q8N196 739 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 KCT2Q8NC54 265 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 OR6C4Q8NGE1 309 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 RBP7Q96R05 134 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 GSDMCQ9BYG8 508 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 PLEKHA1Q9HB21 404 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 KCMF1Q9P0J7 381 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 CLEC4AQ9UMR7 237 aa17.66■□□□□ 0.42
RTN4-201ENST00000317610 PCDHGA9Q9Y5G4 932 aaKnown RBP17.66■□□□□ 0.42
RTN4-201ENST00000317610 A0A1W2PRG6 482 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 ARL6IP5O75915 188 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 CSF2RAP15509 400 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 ZNF3P17036 446 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 SRP54P61011 504 aaKnown RBP17.65■□□□□ 0.42
RTN4-201ENST00000317610 PUDPQ08623 228 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 TJAP1Q5JTD0 557 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 AGBL4Q5VU57 503 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 OR4K14Q8NGD5 310 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 OR4C6Q8NH72 309 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 SMAP2Q8WU79 429 aaPredicted RBP17.65■□□□□ 0.42
RTN4-201ENST00000317610 THAP4Q8WY91 577 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 COL26A1Q96A83 441 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 SMIM19Q96E16 107 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 ZNF436Q9C0F3 470 aaPredicted RBP17.65■□□□□ 0.42
RTN4-201ENST00000317610 C20orf85Q9H1P6 137 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 BRD7Q9NPI1 651 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 KCNE5Q9UJ90 142 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 FBXL4Q9UKA2 621 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 MRPS7Q9Y2R9 242 aaKnown RBP17.65■□□□□ 0.42
RTN4-201ENST00000317610 MED31Q9Y3C7 131 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 PLEKHM1Q9Y4G2 1056 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 DOCK9Q9BZ29 2069 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 GOLGA4Q13439 2230 aaKnown RBP17.65■□□□□ 0.42
RTN4-201ENST00000317610 I3L521 148 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 CD1AP06126 327 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 EPCAMP16422 314 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 POLR2CP19387 275 aaPredicted RBP17.65■□□□□ 0.42
RTN4-201ENST00000317610 VIPR2P41587 438 aa17.65■□□□□ 0.42
RTN4-201ENST00000317610 MNX1P50219 401 aaPredicted RBP17.65■□□□□ 0.42
RTN4-201ENST00000317610 CDK5R1Q15078 307 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms