RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 FGL2Q14314 439 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 SLC9A5Q14940 896 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 GPNMBQ14956 572 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 LINC00303Q3SY05 128 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 ZNF805Q5CZA5 627 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 PARS2Q7L3T8 475 aaKnown RBP13.61□□□□□ -0.23
COL6A2-202ENST00000310645 DEFB128Q7Z7B8 93 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 OR13C2Q8NGS9 318 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 PGLYRP3Q96LB9 341 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 DMRTA2Q96SC8 542 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 C7orf50Q9BRJ6 194 aaKnown RBP13.61□□□□□ -0.23
COL6A2-202ENST00000310645 C1QTNF2Q9BXJ5 285 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 SLC46A2Q9BY10 475 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 RHBGQ9H310 441 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 STARD7Q9NQZ5 370 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 SIDT1Q9NXL6 827 aaKnown RBP13.61□□□□□ -0.23
COL6A2-202ENST00000310645 ACSL5Q9ULC5 683 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 A0A1W2PR48 441 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 PSMD9O00233 223 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 MAN2B1O00754 1011 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 LILRB5O75023 590 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 SBK2P0C263 348 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 HOXB3P14651 431 aaPredicted RBP13.61□□□□□ -0.23
COL6A2-202ENST00000310645 PSMB10P40306 273 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 FNTBP49356 437 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 ZNF85Q03923 595 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 CRMP1Q14194 572 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 ADIPOR2Q86V24 386 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 GJD3Q8N144 294 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 NARS2Q96I59 477 aaKnown RBP13.61□□□□□ -0.23
COL6A2-202ENST00000310645 PCDHB16Q9NRJ7 776 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 TCF20Q9UGU0 1960 aaKnown RBP13.61□□□□□ -0.23
COL6A2-202ENST00000310645 SUSD5O60279 629 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 CREBL2O60519 120 aaPredicted RBP13.61□□□□□ -0.23
COL6A2-202ENST00000310645 ZIC2O95409 532 aaPredicted RBP13.61□□□□□ -0.23
COL6A2-202ENST00000310645 RLN1P04808 185 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 MAT2AP31153 395 aaKnown RBP13.61□□□□□ -0.23
COL6A2-202ENST00000310645 S100A11P31949 105 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 DCTDP32321 178 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 PRR5P85299 388 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 HEPHL1Q6MZM0 1159 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 DPPA4Q7L190 304 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 FCRLAQ7L513 359 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 BOLLQ8N9W6 283 aaKnown RBP13.61□□□□□ -0.23
COL6A2-202ENST00000310645 C1orf216Q8TAB5 229 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 HAVCR2Q8TDQ0 301 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 KISS1RQ969F8 398 aaPredicted RBP13.61□□□□□ -0.23
COL6A2-202ENST00000310645 ZMYND19Q96E35 227 aaPredicted RBP13.61□□□□□ -0.23
COL6A2-202ENST00000310645 FAM83CQ9BQN1 747 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 ZNF416Q9BWM5 594 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 ABRACLQ9P1F3 81 aa13.61□□□□□ -0.23
COL6A2-202ENST00000310645 TBX19O60806 448 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 CBX7O95931 251 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 GDI2P50395 445 aaKnown RBP13.6□□□□□ -0.23
COL6A2-202ENST00000310645 FXYD6P3P58550 94 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 FOXK2Q01167 660 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 TFAP2EQ6VUC0 442 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 TMUB2Q71RG4 321 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 PXKQ7Z7A4 578 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 SLC16A11Q8NCK7 471 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 OR5M1Q8NGP8 315 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 DPYSL5Q9BPU6 564 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 SLC23A2Q9UGH3 650 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 CENPVL1A0A0U1RR11 272 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 SYT5O00445 386 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 TGM6O95932 706 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 ATP1B1P05026 303 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 NRG3P56975 720 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 HS6ST2Q96MM7 605 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 LDAHQ9H6V9 325 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 CACYBPQ9HB71 228 aaKnown RBP13.6□□□□□ -0.23
COL6A2-202ENST00000310645 HMX1Q9NP08 348 aaPredicted RBP13.6□□□□□ -0.23
COL6A2-202ENST00000310645 NPDC1Q9NQX5 325 aaPredicted RBP13.6□□□□□ -0.23
COL6A2-202ENST00000310645 PCDHGA5Q9Y5G8 931 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 NPIPA5A0A0B4J1W7 369 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 ACOD1A6NK06 481 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 SLC22A31A6NKX4 558 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 NPIPA7E9PJI5 369 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 KRT33AO76009 404 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 NPIPA8P0DM63 369 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 IL9P15248 144 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 SYN1P17600 705 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 RPL35P42766 123 aaKnown RBP13.6□□□□□ -0.23
COL6A2-202ENST00000310645 SEC61A1P61619 476 aaKnown RBP13.6□□□□□ -0.23
COL6A2-202ENST00000310645 MAPK14Q16539 360 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 DCUN1D3Q8IWE4 304 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 BVESQ8NE79 360 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 DTD2Q96FN9 168 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 TAS2R10Q9NYW0 307 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 USP36Q9P275 1121 aaKnown RBP13.6□□□□□ -0.23
COL6A2-202ENST00000310645 CA5BQ9Y2D0 317 aa13.6□□□□□ -0.23
COL6A2-202ENST00000310645 A0A1B0GUH1 482 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 ANKRD61A6NGH8 418 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 H3BSH0 61 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 PRAF2O60831 178 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 CSNK2A2P19784 350 aaPredicted RBP13.59□□□□□ -0.23
COL6A2-202ENST00000310645 ETFDHQ16134 617 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 PUS10Q3MIT2 529 aaKnown RBP13.59□□□□□ -0.23
COL6A2-202ENST00000310645 LY6G5CQ5SRR4 150 aa13.59□□□□□ -0.23
COL6A2-202ENST00000310645 GLDNQ6ZMI3 551 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms