RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.66□□□□□ -1.02
VPS41-201ENST00000265745 SERINC4A6NH21 518 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 ARHGEF9O43307 516 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 SMPD2O60906 423 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 STX11O75558 287 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 UGT2B17O75795 530 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 PRKD3O94806 890 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 AK1P00568 194 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 YES1P07947 543 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 ENPP1P22413 925 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 SOAT1P35610 550 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 SLC1A6P48664 564 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 CBFBQ13951 182 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 QPRTQ15274 297 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 RNPS1Q15287 305 aaKnown RBP8.66□□□□□ -1.02
VPS41-201ENST00000265745 GPR68Q15743 365 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 ARHGAP11BQ3KRB8 267 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 BEX5Q5H9J7 111 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 ANXA8L1Q5VT79 327 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 HEPHL1Q6MZM0 1159 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 PRSS57Q6UWY2 283 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 C20orf204Q6ZNR8 217 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 FCRLAQ7L513 359 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 OLIG3Q7RTU3 272 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 NUFIP2Q7Z417 695 aaKnown RBP8.66□□□□□ -1.02
VPS41-201ENST00000265745 BIVMQ86UB2 503 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 STK32CQ86UX6 486 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 TUSC5Q8IXB3 177 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 LRRC34Q8IZ02 419 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 GABRG1Q8N1C3 465 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 ATP6V1C2Q8NEY4 427 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 TOR1AIP2Q8NFQ8 470 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 OR4A15Q8NGL6 344 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 TESCQ96BS2 214 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 REXO5Q96IC2 774 aaKnown RBP8.66□□□□□ -1.02
VPS41-201ENST00000265745 C18orf12Q96KH6 178 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 SMR3AQ99954 134 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 HDHD5Q9BXW7 423 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 DPY30Q9C005 99 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 ACTR6Q9GZN1 396 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 ZNF350Q9GZX5 532 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 LAT2Q9GZY6 243 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 COQ10BQ9H8M1 238 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 UBTD1Q9HAC8 227 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 KLHL13Q9P2N7 655 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 RAB21Q9UL25 225 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 MKLN1Q9UL63 735 aa8.66□□□□□ -1.02
VPS41-201ENST00000265745 NIPBLQ6KC79 2804 aaeCLIP8.66□□□□□ -1.02
VPS41-201ENST00000265745 ROS1P08922 2347 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 MED12LQ86YW9 2145 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 FLNAP21333 2647 aaKnown RBP8.65□□□□□ -1.02
VPS41-201ENST00000265745 CENPVL1A0A0U1RR11 272 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 FBXO24O75426 580 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 GCM2O75603 506 aaPredicted RBP8.65□□□□□ -1.02
VPS41-201ENST00000265745 CSTAP01040 98 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 GUSBP08236 651 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 INHBBP09529 407 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 OR12D1P0DN82 309 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 UBL4AP11441 157 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 LBPP18428 481 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 BGNP21810 368 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 UQCRC2P22695 453 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 NR1H2P55055 460 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 CASP9P55211 416 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 SESN3P58005 492 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 RAC3P60763 192 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 SELENBP1Q13228 472 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 STX3Q13277 289 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 SKP2Q13309 424 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 CASP8Q14790 479 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 MAPK14Q16539 360 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 TIGD2Q4W5G0 525 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 TMEM201Q5SNT2 666 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 CEP85LQ5SZL2 805 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 TFAP2EQ6VUC0 442 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 ANKRD46Q86W74 232 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 P3H2Q8IVL5 708 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 KIRREL3Q8IZU9 778 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 SLC43A2Q8N370 569 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 VPS37AQ8NEZ2 397 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 STEAP2Q8NFT2 490 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 RFWD2Q8NHY2 731 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 ZFP90Q8TF47 636 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 XAGE5Q8WWM1 108 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 IGFBPL1Q8WX77 278 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 ZG16BQ96DA0 208 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 CCL19Q99731 98 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 TMEM204Q9BSN7 226 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 THUMPD3Q9BV44 507 aaKnown RBP8.65□□□□□ -1.02
VPS41-201ENST00000265745 NUF2Q9BZD4 464 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 OR51I1Q9H343 314 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 MEAF6Q9HAF1 191 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 BCO1Q9HAY6 547 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 KCNK9Q9NPC2 374 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 EXD2Q9NVH0 621 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 PNPOQ9NVS9 261 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 ING1Q9UK53 422 aaPredicted RBP8.65□□□□□ -1.02
VPS41-201ENST00000265745 NAV3Q8IVL0 2385 aa8.65□□□□□ -1.02
VPS41-201ENST00000265745 ZNF814B7Z6K7 855 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 KIAA0513O60268 411 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms