RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ZNF317Q96PQ6 595 aaPredicted RBP21.87■■□□□ 1.09
SDF2L1-201ENST00000248958 PRRG4Q9BZD6 226 aa21.87■■□□□ 1.09
SDF2L1-201ENST00000248958 RNF122Q9H9V4 155 aa21.87■■□□□ 1.09
SDF2L1-201ENST00000248958 JKAMPQ9P055 326 aa21.87■■□□□ 1.09
SDF2L1-201ENST00000248958 C5orf58C9J3I9 102 aa21.86■■□□□ 1.09
SDF2L1-201ENST00000248958 FAAHO00519 579 aa21.86■■□□□ 1.09
SDF2L1-201ENST00000248958 TNFSF11O14788 317 aa21.86■■□□□ 1.09
SDF2L1-201ENST00000248958 EFNA2O43921 213 aa21.86■■□□□ 1.09
SDF2L1-201ENST00000248958 SYNGR4O95473 234 aa21.86■■□□□ 1.09
SDF2L1-201ENST00000248958 UQCRBP14927 111 aa21.86■■□□□ 1.09
SDF2L1-201ENST00000248958 APOBEC1P41238 236 aaKnown RBP21.86■■□□□ 1.09
SDF2L1-201ENST00000248958 FOXF2Q12947 444 aa21.86■■□□□ 1.09
SDF2L1-201ENST00000248958 MAPRE2Q15555 327 aa21.86■■□□□ 1.09
SDF2L1-201ENST00000248958 RUNDC3AQ59EK9 446 aa21.86■■□□□ 1.09
SDF2L1-201ENST00000248958 GCNT6Q5T4J0 391 aa21.86■■□□□ 1.09
SDF2L1-201ENST00000248958 MRPL2Q5T653 305 aaKnown RBP21.86■■□□□ 1.09
SDF2L1-201ENST00000248958 PLXDC2Q6UX71 529 aa21.86■■□□□ 1.09
SDF2L1-201ENST00000248958 HMGN2P46Q86SG4 172 aa21.86■■□□□ 1.09
SDF2L1-201ENST00000248958 DMRTC2Q8IXT2 367 aaPredicted RBP21.86■■□□□ 1.09
SDF2L1-201ENST00000248958 FNDC9Q8TBE3 224 aa21.86■■□□□ 1.09
SDF2L1-201ENST00000248958 TMEM185BQ9H7F4 350 aa21.86■■□□□ 1.09
SDF2L1-201ENST00000248958 DNAJB12Q9NXW2 375 aaKnown RBP21.86■■□□□ 1.09
SDF2L1-201ENST00000248958 SPIN1Q9Y657 262 aaPredicted RBP21.86■■□□□ 1.09
SDF2L1-201ENST00000248958 CLDN24A6NM45 220 aa21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 CXCL13O43927 109 aa21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 NUDT7P0C024 238 aa21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 CD1EP15812 388 aa21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 IL11P20809 199 aa21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 FKBP2P26885 142 aaKnown RBP21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 SFTPDP35247 375 aa21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 CARD18P57730 90 aa21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 RNF220Q5VTB9 566 aa21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 GTF2IRD2BQ6EKJ0 949 aa21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 PLEKHM3Q6ZWE6 761 aa21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 GRINAQ7Z429 371 aa21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 GDF7Q7Z4P5 450 aa21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 GTF2IRD2Q86UP8 949 aa21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 GCNT2Q8N0V5 402 aa21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 SLC25A43Q8WUT9 341 aaPredicted RBP21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 CNOT9Q92600 299 aaKnown RBP21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 OSTF1Q92882 214 aa21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 CPNE4Q96A23 557 aaPredicted RBP21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 TMEM38AQ9H6F2 299 aa21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 GLRX2Q9NS18 164 aa21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 PACSIN3Q9UKS6 424 aa21.85■■□□□ 1.09
SDF2L1-201ENST00000248958 A0A1W2PNV4 684 aa21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 CDHR4A6H8M9 788 aa21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 BCAS1O75363 584 aaPredicted RBP21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 TNFSF13O75888 250 aa21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 OPN1LWP04000 364 aa21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 PABPC4LP0CB38 370 aaKnown RBP21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 ARAFP10398 606 aa21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 ETS2P15036 469 aa21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 RYKP34925 604 aa21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 HTR3AP46098 478 aa21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 AGFG1P52594 562 aaKnown RBP21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 MERTKQ12866 999 aa21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 NFYCQ13952 458 aa21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 TMEM176BQ3YBM2 270 aaPredicted RBP21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 COQ5Q5HYK3 327 aa21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 VRK2Q86Y07 508 aa21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 MCEMP1Q8IX19 187 aa21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 ZNF524Q96C55 264 aa21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 ANKRD27Q96NW4 1050 aa21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 CGREF1Q99674 301 aa21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 CPPED1Q9BRF8 314 aaPredicted RBP21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 SAR1AQ9NR31 198 aa21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 ZNF443Q9Y2A4 671 aaPredicted RBP21.84■■□□□ 1.09
SDF2L1-201ENST00000248958 CFAP73A6NFT4 308 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 BBIP1A8MTZ0 92 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 EEF1E1-BLOC1S5C9J1V9 151 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 SLC22A2O15244 555 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 EEF1E1O43324 174 aaKnown RBP21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 PGM3O95394 542 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 SLC7A1P30825 629 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 CDK6Q00534 326 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 PLAURQ03405 335 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 KLF10Q13118 480 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 RPS26P11Q5JNZ5 115 aaPredicted RBP21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 REEP3Q6NUK4 255 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 PPP4R4Q6NUP7 873 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 ZNF836Q6ZNA1 936 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 ZNF550Q7Z398 422 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 RETREG3Q86VR2 466 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 KIF18BQ86Y91 864 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 C10orf82Q8WW14 230 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 MAL2Q969L2 176 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 C14orf79Q96F83 325 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 REXO5Q96IC2 774 aaKnown RBP21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 SPATA5L1Q9BVQ7 753 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 SPATA9Q9BWV2 254 aa21.83■■□□□ 1.09
SDF2L1-201ENST00000248958 MSTNO14793 375 aa21.82■■□□□ 1.08
SDF2L1-201ENST00000248958 NPPAP01160 153 aa21.82■■□□□ 1.08
SDF2L1-201ENST00000248958 SLC6A2P23975 617 aa21.82■■□□□ 1.08
SDF2L1-201ENST00000248958 SSTR2P30874 369 aa21.82■■□□□ 1.08
SDF2L1-201ENST00000248958 UQCRC1P31930 480 aa21.82■■□□□ 1.08
SDF2L1-201ENST00000248958 IDH2P48735 452 aaKnown RBP21.82■■□□□ 1.08
SDF2L1-201ENST00000248958 MAP2K6P52564 334 aa21.82■■□□□ 1.08
SDF2L1-201ENST00000248958 EPS8Q12929 822 aa21.82■■□□□ 1.08
SDF2L1-201ENST00000248958 ZNF311Q5JNZ3 666 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms