RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 ASRGL1Q7L266 308 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 ANKRD33Q7Z3H0 272 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 PIGCQ92535 297 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 ST6GALNAC5Q9BVH7 336 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 SAP130Q9H0E3 1048 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 TMEM184BQ9Y519 407 aaPredicted RBP17.71■□□□□ 0.43
SMPD3-201ENST00000219334 TPMTP51580 245 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 SGPP2Q8IWX5 399 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 OR1J2Q8NGS2 313 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 TMEM269A0A1B0GVZ9 245 aa17.71■□□□□ 0.42
SMPD3-201ENST00000219334 OR5K3A6NET4 321 aa17.71■□□□□ 0.42
SMPD3-201ENST00000219334 KDM4EB2RXH2 506 aaPredicted RBP17.71■□□□□ 0.42
SMPD3-201ENST00000219334 D6RAR5 112 aa17.71■□□□□ 0.42
SMPD3-201ENST00000219334 CBX7O95931 251 aa17.71■□□□□ 0.42
SMPD3-201ENST00000219334 EPHA1P21709 976 aa17.71■□□□□ 0.42
SMPD3-201ENST00000219334 GPX3P22352 226 aa17.71■□□□□ 0.42
SMPD3-201ENST00000219334 CD40LGP29965 261 aa17.71■□□□□ 0.42
SMPD3-201ENST00000219334 EIF5A2Q9GZV4 153 aaKnown RBP17.71■□□□□ 0.42
SMPD3-201ENST00000219334 THSD1Q9NS62 852 aa17.71■□□□□ 0.42
SMPD3-201ENST00000219334 B4DXG7 233 aa17.7■□□□□ 0.42
SMPD3-201ENST00000219334 DCNP07585 359 aaKnown RBP17.7■□□□□ 0.42
SMPD3-201ENST00000219334 HTR5AP47898 357 aa17.7■□□□□ 0.42
SMPD3-201ENST00000219334 EFNA3P52797 238 aa17.7■□□□□ 0.42
SMPD3-201ENST00000219334 ZNF322Q6U7Q0 402 aaPredicted RBP17.7■□□□□ 0.42
SMPD3-201ENST00000219334 LSM14AQ8ND56 463 aaKnown RBP17.7■□□□□ 0.42
SMPD3-201ENST00000219334 ZNF845Q96IR2 970 aaPredicted RBP17.7■□□□□ 0.42
SMPD3-201ENST00000219334 MRPS2Q9Y399 296 aaKnown RBP17.7■□□□□ 0.42
SMPD3-201ENST00000219334 MMACHCQ9Y4U1 282 aa17.7■□□□□ 0.42
SMPD3-201ENST00000219334 DPP4P27487 766 aa17.7■□□□□ 0.42
SMPD3-201ENST00000219334 ADRA1AP35348 466 aa17.7■□□□□ 0.42
SMPD3-201ENST00000219334 SYPL1Q16563 259 aa17.7■□□□□ 0.42
SMPD3-201ENST00000219334 DUSP6Q16828 381 aa17.7■□□□□ 0.42
SMPD3-201ENST00000219334 C14orf28Q4W4Y0 310 aa17.7■□□□□ 0.42
SMPD3-201ENST00000219334 GARNL3Q5VVW2 1013 aa17.7■□□□□ 0.42
SMPD3-201ENST00000219334 VASNQ6EMK4 673 aa17.7■□□□□ 0.42
SMPD3-201ENST00000219334 FAM160A2Q8N612 972 aaPredicted RBP17.7■□□□□ 0.42
SMPD3-201ENST00000219334 OR8U9P0C7N5 309 aa17.7■□□□□ 0.42
SMPD3-201ENST00000219334 MTHFD2P13995 350 aa17.7■□□□□ 0.42
SMPD3-201ENST00000219334 GABRR1P24046 479 aa17.7■□□□□ 0.42
SMPD3-201ENST00000219334 SLC35A1P78382 337 aa17.7■□□□□ 0.42
SMPD3-201ENST00000219334 AK6Q9Y3D8 172 aaKnown RBP17.7■□□□□ 0.42
SMPD3-201ENST00000219334 PCP4L1A6NKN8 68 aa17.7■□□□□ 0.42
SMPD3-201ENST00000219334 CD53P19397 219 aa17.7■□□□□ 0.42
SMPD3-201ENST00000219334 RPP30P78346 268 aaKnown RBP17.7■□□□□ 0.42
SMPD3-201ENST00000219334 FOXRED1Q96CU9 486 aaPredicted RBP17.7■□□□□ 0.42
SMPD3-201ENST00000219334 ZNF578Q96N58 590 aaPredicted RBP17.7■□□□□ 0.42
SMPD3-201ENST00000219334 ARL6Q9H0F7 186 aa17.7■□□□□ 0.42
SMPD3-201ENST00000219334 TAS2R3Q9NYW6 316 aa17.7■□□□□ 0.42
SMPD3-201ENST00000219334 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.7■□□□□ 0.42
SMPD3-201ENST00000219334 PRRC2BQ5JSZ5 2229 aaKnown RBP17.7■□□□□ 0.42
SMPD3-201ENST00000219334 SUSD5O60279 629 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 KLKB1P03952 638 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 TPOP07202 933 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 IMPA1P29218 277 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 CXCR4P61073 352 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 SIRPAP78324 504 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 GPLD1P80108 840 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 PCGF3Q3KNV8 242 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 OR56B2PQ8NGI1 322 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 OR1S1Q8NH92 325 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 ZNF775Q96BV0 537 aaPredicted RBP17.69■□□□□ 0.42
SMPD3-201ENST00000219334 ASB16Q96NS5 453 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 CLMPQ9H6B4 373 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 GABBR2O75899 941 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 C17orf67Q0P5P2 114 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 MRPL2Q5T653 305 aaKnown RBP17.69■□□□□ 0.42
SMPD3-201ENST00000219334 FAM83HQ6ZRV2 1179 aaPredicted RBP17.69■□□□□ 0.42
SMPD3-201ENST00000219334 MEX3DQ86XN8 651 aaKnown RBP17.69■□□□□ 0.42
SMPD3-201ENST00000219334 IL1F10Q8WWZ1 152 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 EGLN2Q96KS0 407 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 TM7SF3Q9NS93 570 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 MYF6P23409 242 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 PSMB10P40306 273 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 ZNF616Q08AN1 781 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 ZNF566Q969W8 418 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 LCORQ96JN0 433 aaPredicted RBP17.69■□□□□ 0.42
SMPD3-201ENST00000219334 EPHX3Q9H6B9 360 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 HMX3A6NHT5 357 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 TOXO94900 526 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 CLDN17P56750 224 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 SMAD4Q13485 552 aaKnown RBP17.69■□□□□ 0.42
SMPD3-201ENST00000219334 ADAMTS19Q8TE59 1207 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 PIGQQ9BRB3 760 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 FUNDC2Q9BWH2 189 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 SLC6A17Q9H1V8 727 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 GPR45Q9Y5Y3 372 aa17.69■□□□□ 0.42
SMPD3-201ENST00000219334 HCRTR1O43613 425 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 ITGBL1O95965 494 aaPredicted RBP17.68■□□□□ 0.42
SMPD3-201ENST00000219334 ARSBP15848 533 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 PDE7AQ13946 482 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 FAM217AQ8IXS0 508 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 ESX1Q8N693 406 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 PHB2Q99623 299 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 MMP17Q9ULZ9 603 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 SHISA7A6NL88 538 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 G3V3Y1 287 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 H0YIV9 168 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 CAV2P51636 162 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 RAB40BQ12829 278 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 SLC22A6Q4U2R8 563 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms