RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 HTRA4P83105 476 aaPredicted RBP8.38□□□□□ -1.07
VCL-206ENST00000623461 BEND4Q6ZU67 534 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 TMEM175Q9BSA9 504 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 C12orf10Q9HB07 376 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 PLAGL1Q9UM63 463 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 BACE2Q9Y5Z0 518 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 PDE4DIPQ5VU43 2346 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 RGS13O14921 159 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 VEGFDO43915 354 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 CPEP16870 476 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 RAB4BP61018 213 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 KCTD11Q693B1 232 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 GLYATL2Q8WU03 294 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 GABARAPL3Q9BY60 117 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 OR52A5Q9H2C5 316 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 ASIC5Q9NY37 505 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 MARF1Q9Y4F3 1742 aaKnown RBP8.38□□□□□ -1.07
VCL-206ENST00000623461 PPP6CO00743 305 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 ADRA1AP35348 466 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 CDK3Q00526 305 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 ARSJQ5FYB0 599 aaPredicted RBP8.38□□□□□ -1.07
VCL-206ENST00000623461 DCST2Q5T1A1 773 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 NIPAL3Q6P499 406 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 Q6ZPB1 254 aaPredicted RBP8.38□□□□□ -1.07
VCL-206ENST00000623461 ACVR1CQ8NER5 493 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 OR4F15Q8NGB8 312 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 ZDHHC12Q96GR4 267 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 SLC25A18Q9H1K4 315 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 SLAMF7Q9NQ25 335 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 CAMTA1Q9Y6Y1 1673 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 A0A0A6YYJ9 748 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 SLC9B1P1A6NJY1 282 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 ZNF623O75123 536 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 CASP6P55212 293 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 TMEM41BQ5BJD5 291 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 BEX5Q5H9J7 111 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 VITQ6UXI7 678 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 MFSD6LQ8IWD5 586 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 SLC30A7Q8NEW0 376 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 C14orf79Q96F83 325 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 NDUFB11Q9NX14 153 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 C17orf113A0A1B0GUU1 675 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 CCL16O15467 120 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 HCRTR2O43614 444 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 ELK1P19419 428 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 NXNL2Q5VZ03 156 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 Q6ZVU0 165 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 DPPA2Q7Z7J5 298 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 ZNF561Q8N587 486 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 ABHD4Q8TB40 342 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 SLC25A21Q9BQT8 299 aaPredicted RBP8.37□□□□□ -1.07
VCL-206ENST00000623461 NPFFR2Q9Y5X5 522 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 TCRBV5S2A0A599 114 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 TMEM129A0AVI4 362 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 K7EPK0 472 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 ZNF16P17020 682 aaPredicted RBP8.37□□□□□ -1.07
VCL-206ENST00000623461 CBLP22681 906 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 STK19P49842 368 aaPredicted RBP8.37□□□□□ -1.07
VCL-206ENST00000623461 GPR17Q13304 367 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 PUS10Q3MIT2 529 aaKnown RBP8.37□□□□□ -1.07
VCL-206ENST00000623461 ARHGAP40Q5TG30 622 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 BPHLQ86WA6 291 aaPredicted RBP8.37□□□□□ -1.07
VCL-206ENST00000623461 ZNF619Q8N2I2 560 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 FAM71E2Q8N5Q1 922 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 ZMYND19Q96E35 227 aaPredicted RBP8.37□□□□□ -1.07
VCL-206ENST00000623461 LRIG1Q96JA1 1093 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 MYADMQ96S97 322 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 TGIF2Q9GZN2 237 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 DMRT3Q9NQL9 472 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 PCYT1BQ9Y5K3 369 aaPredicted RBP8.37□□□□□ -1.07
VCL-206ENST00000623461 EDDM13A0A1B0GTR0 161 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 ZNF195O14628 629 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 SIX6O95475 246 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 ATP1B1P05026 303 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 ZNF140P52738 457 aaPredicted RBP8.37□□□□□ -1.07
VCL-206ENST00000623461 TRA2BP62995 288 aaKnown RBP8.37□□□□□ -1.07
VCL-206ENST00000623461 GPLD1P80108 840 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 KIAA0141Q14154 515 aaPredicted RBP8.37□□□□□ -1.07
VCL-206ENST00000623461 ZNF551Q7Z340 670 aaPredicted RBP8.37□□□□□ -1.07
VCL-206ENST00000623461 CTU1Q7Z7A3 348 aaKnown RBP8.37□□□□□ -1.07
VCL-206ENST00000623461 ASPGQ86U10 573 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 CDH26Q8IXH8 852 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 MED18Q9BUE0 208 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 A0A0B4J2A0 478 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 A0A0U1RQF3 1178 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 DPM1O60762 260 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 KCNK5O95279 499 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 ASGR2P07307 311 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 SNRPBP14678 240 aaKnown RBP8.37□□□□□ -1.07
VCL-206ENST00000623461 HTR1FP30939 366 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 CAV2P51636 162 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 LILRB2Q8N423 598 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 DNAAF1Q8NEP3 725 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 LFNGQ8NES3 379 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 OR56B2PQ8NGI1 322 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 YIPF5Q969M3 257 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 MS4A4EQ96PG1 132 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 SHPKQ9UHJ6 478 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 PFKMP08237 780 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 WNT7BP56706 349 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms