RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 HTR1FP30939 366 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 GJA4P35212 333 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 MAP3K8P41279 467 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 VEGFBP49765 207 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 TRA2BP62995 288 aaKnown RBP6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ACTC1P68032 377 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ACTA1P68133 377 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 OC90Q02509 493 aaPredicted RBP6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 MESP2Q0VG99 397 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 GPR176Q14439 515 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ITPRIPL2Q3MIP1 535 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 C12orf73Q69YU5 71 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 C1orf94Q6P1W5 598 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ZNF793Q6ZN11 406 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ZNF767PQ75MW2 155 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ZNF765Q7L2R6 523 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ABI3BPQ7Z7G0 1075 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ATCAYQ86WG3 371 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 PLCZ1Q86YW0 608 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 LRRC56Q8IYG6 542 aaPredicted RBP6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ZNF619Q8N2I2 560 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ABHD4Q8TB40 342 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 FBLIM1Q8WUP2 373 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 CREB3L1Q96BA8 519 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ORAI1Q96D31 301 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 MRGPRX3Q96LB0 322 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 C5orf34Q96MH7 638 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 WDR92Q96MX6 357 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 C19orf43Q9BQ61 176 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 FN3KQ9H479 309 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ELL3Q9HB65 397 aaPredicted RBP6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 DIABLOQ9NR28 239 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 CKLFQ9UBR5 152 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 LAMP5Q9UJQ1 280 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ADAM29Q9UKF5 820 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 RCE1Q9Y256 329 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 OTOFQ9HC10 1997 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ARPC1BO15143 372 aaKnown RBP6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 DPM1O60762 260 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 CXCL10P02778 98 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 CLUP10909 449 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 MYOGP15173 224 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 CFL1P23528 166 aaKnown RBP6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 AKT2P31751 481 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 MLLT3P42568 568 aaPredicted RBP6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 AKR1D1P51857 326 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 FOXK2Q01167 660 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 GPR50Q13585 617 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 TAF13Q15543 124 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 PRSS53Q2L4Q9 553 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 CCDC58Q4VC31 144 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 FAAH2Q6GMR7 532 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 TANGO2Q6ICL3 276 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ARHGAP11AQ6P4F7 1023 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 LEG1Q6P5S2 330 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 QSOX2Q6ZRP7 698 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 JAGN1Q8N5M9 183 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 CDRT4Q8N9R6 151 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 OR7G1Q8NGA0 311 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 OR2A1Q8NGT9 310 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 CEP76Q8TAP6 659 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 GAL3ST3Q96A11 431 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 MMABQ96EY8 250 aaPredicted RBP6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 SLC38A3Q99624 504 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 PDCD1LG2Q9BQ51 273 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 IL23AQ9NPF7 189 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 REV1Q9UBZ9 1251 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 FARSAQ9Y285 508 aaKnown RBP6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 MAB21L2Q9Y586 359 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ANKRD61A6NGH8 418 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 PLGP00747 810 aaPredicted RBP6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 CA3P07451 260 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 LIMS3P0CW19 117 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 LIMS4P0CW20 117 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 F3P13726 295 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 CPMP14384 443 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 FPR3P25089 353 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 PTGS2P35354 604 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 EIF1AXP47813 144 aaKnown RBP6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 DNASE1L1P49184 302 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 EVX1P49640 407 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 TPBGQ13641 420 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 AGERQ15109 404 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 MFSD12Q6NUT3 480 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ZNF620Q6ZNG0 422 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 SIAH3Q8IW03 269 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 OR7G2Q8NG99 324 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 OR5T3Q8NGG3 340 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 SFXN5Q8TD22 340 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ELMOD3Q96FG2 381 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 GPA33Q99795 319 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ZFYVE21Q9BQ24 234 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ARL6Q9H0F7 186 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 TMEM168Q9H0V1 697 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 CDCP1Q9H5V8 836 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 EXO5Q9H790 373 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 GRHPRQ9UBQ7 328 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 UBQLN2Q9UHD9 624 aa6.39□□□□□ -1.39
SYNPO2-206ENST00000610556 SLC35A3Q9Y2D2 325 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms