RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 RBM18Q96H35 190 aaKnown RBP6.64□□□□□ -1.35
SPIDR-228ENST00000588781 MRGPRX1Q96LB2 322 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 CMTM3Q96MX0 182 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 DGAT2Q96PD7 388 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 UBL7Q96S82 380 aaPredicted RBP6.64□□□□□ -1.35
SPIDR-228ENST00000588781 PRSS27Q9BQR3 290 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 C7orf50Q9BRJ6 194 aaKnown RBP6.64□□□□□ -1.35
SPIDR-228ENST00000588781 TRAF4Q9BUZ4 470 aaPredicted RBP6.64□□□□□ -1.35
SPIDR-228ENST00000588781 MRI1Q9BV20 369 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 TMED9Q9BVK6 235 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 PBX4Q9BYU1 374 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.64□□□□□ -1.35
SPIDR-228ENST00000588781 DPH1Q9BZG8 443 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 SLC19A3Q9BZV2 496 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 MIXL1Q9H2W2 232 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 RNF121Q9H920 327 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 UCK1Q9HA47 277 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 CERS4Q9HA82 394 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 FOLH1BQ9HBA9 442 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 TIGARQ9NQ88 270 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 INIPQ9NRY2 104 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 SACM1LQ9NTJ5 587 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 RBFOX1Q9NWB1 397 aaKnown RBP6.64□□□□□ -1.35
SPIDR-228ENST00000588781 CLDND1Q9NY35 253 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 AKAP7Q9P0M2 348 aaPredicted RBP6.64□□□□□ -1.35
SPIDR-228ENST00000588781 COMMD3Q9UBI1 195 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 MMP17Q9ULZ9 603 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 CHST2Q9Y4C5 530 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 CSNK1G3Q9Y6M4 447 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 PIAS3Q9Y6X2 628 aa6.64□□□□□ -1.35
SPIDR-228ENST00000588781 TRBV23OR9-2A0A075B6M9 112 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 A0A0B4J2E0 115 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 FAM240BA0A1B0GVZ2 78 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 A0A1B0GX12 115 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 TCRBV21S2A2A0A5A6 115 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 GXYLT2A0PJZ3 443 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 PRR33A8MZF0 331 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 CENPBD1B2RD01 187 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 J3QRE1 110 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 SOCS6O14544 535 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 PDCD5O14737 125 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 PLPP2O43688 288 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 FGF17O60258 216 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 GPRIN2O60269 458 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 PIP5K1CO60331 668 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 CTNSO60931 367 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 ZIC2O95409 532 aaPredicted RBP6.63□□□□□ -1.35
SPIDR-228ENST00000588781 IGLV3-19P01714 112 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 CSF3P09919 207 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 SBK2P0C263 348 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 CLEC2LP0C7M8 214 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 OR2T7P0C7T2 308 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 IGFBP4P22692 258 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 PTGER1P34995 402 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 NR4A2P43354 598 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 TPMTP51580 245 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 VSX2P58304 361 aaPredicted RBP6.63□□□□□ -1.35
SPIDR-228ENST00000588781 BTG1P62324 171 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 ZNF141Q15928 474 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 BCL2A1Q16548 175 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 BAK1Q16611 211 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 ISXQ2M1V0 245 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.63□□□□□ -1.35
SPIDR-228ENST00000588781 ZNF791Q3KP31 576 aaPredicted RBP6.63□□□□□ -1.35
SPIDR-228ENST00000588781 KLHL12Q53G59 568 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 TRMT12Q53H54 448 aaKnown RBP6.63□□□□□ -1.35
SPIDR-228ENST00000588781 PRRC2BQ5JSZ5 2229 aaKnown RBP6.63□□□□□ -1.35
SPIDR-228ENST00000588781 TCTE1Q5JU00 501 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 PYHIN1Q6K0P9 492 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 CNIH2Q6PI25 160 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 WDR53Q7Z5U6 358 aaPredicted RBP6.63□□□□□ -1.35
SPIDR-228ENST00000588781 HMGN2P46Q86SG4 172 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 OAFQ86UD1 273 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 GATAD2AQ86YP4 633 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 SLITRK4Q8IW52 837 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 OR4N5Q8IXE1 308 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 CELF2-AS1Q8N7Q2 184 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 ZNF527Q8NB42 609 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 SLC37A3Q8NCC5 494 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 SIMC1Q8NDZ2 872 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 DUSP18Q8NEJ0 188 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 OR7G1Q8NGA0 311 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 OR10H4Q8NGA5 316 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 OR52R1Q8NGF1 315 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 OR6F1Q8NGZ6 308 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 OR2T27Q8NH04 317 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 OR5W2Q8NH69 310 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 GRPEL2Q8TAA5 225 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 C15orf40Q8WUR7 153 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 FAM3CQ92520 227 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 THRSPQ92748 146 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 NACC2Q96BF6 587 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 ZG16BQ96DA0 208 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 TCTN2Q96GX1 697 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 AHCYL2Q96HN2 611 aaKnown RBP6.63□□□□□ -1.35
SPIDR-228ENST00000588781 TEAD3Q99594 435 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 TM9SF2Q99805 663 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 ATF6BQ99941 703 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 SOSTQ9BQB4 213 aa6.63□□□□□ -1.35
SPIDR-228ENST00000588781 MFRPQ9BY79 579 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms