RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 ROPN1LQ96C74 230 aa15.85■□□□□ 0.13
TPM4-206ENST00000587201 ARSGQ96EG1 525 aa15.85■□□□□ 0.13
TPM4-206ENST00000587201 REXO5Q96IC2 774 aaKnown RBP15.85■□□□□ 0.13
TPM4-206ENST00000587201 GMPPAQ96IJ6 420 aaPredicted RBP15.85■□□□□ 0.13
TPM4-206ENST00000587201 MRGPRX4Q96LA9 322 aa15.85■□□□□ 0.13
TPM4-206ENST00000587201 INPP5KQ9BT40 448 aa15.85■□□□□ 0.13
TPM4-206ENST00000587201 THUMPD3Q9BV44 507 aaKnown RBP15.85■□□□□ 0.13
TPM4-206ENST00000587201 LIME1Q9H400 295 aa15.85■□□□□ 0.13
TPM4-206ENST00000587201 TIGARQ9NQ88 270 aa15.85■□□□□ 0.13
TPM4-206ENST00000587201 POLE3Q9NRF9 147 aa15.85■□□□□ 0.13
TPM4-206ENST00000587201 ELOVL5Q9NYP7 299 aa15.85■□□□□ 0.13
TPM4-206ENST00000587201 MPDZO75970 2070 aa15.85■□□□□ 0.13
TPM4-206ENST00000587201 KIAA0513O60268 411 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 SS18L1O75177 396 aaPredicted RBP15.84■□□□□ 0.13
TPM4-206ENST00000587201 SLC22A3O75751 556 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 C1QCP02747 245 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 GSNP06396 782 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 GUSBP08236 651 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 UBTFL6P0CB48 400 aaPredicted RBP15.84■□□□□ 0.13
TPM4-206ENST00000587201 CDKN2CP42773 168 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 ANXA11P50995 505 aaKnown RBP15.84■□□□□ 0.13
TPM4-206ENST00000587201 ART1P52961 327 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 IST1P53990 364 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 FUT5Q11128 374 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 SKP2Q13309 424 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 POU4F3Q15319 338 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 MAPK14Q16539 360 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 GSTA3Q16772 222 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 EXOC3L2Q2M3D2 409 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 TMEM176BQ3YBM2 270 aaPredicted RBP15.84■□□□□ 0.13
TPM4-206ENST00000587201 GTF2IRD2BQ6EKJ0 949 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 FRRS1Q6ZNA5 592 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 EIF3MQ7L2H7 374 aaKnown RBP15.84■□□□□ 0.13
TPM4-206ENST00000587201 MAVSQ7Z434 540 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 GTF2IRD2Q86UP8 949 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 ZNF619Q8N2I2 560 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 OR6K3Q8NGY3 331 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 NINJ1Q92982 152 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 GLRX2Q9NS18 164 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 ST6GALNAC2Q9UJ37 374 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 EDARQ9UNE0 448 aa15.84■□□□□ 0.13
TPM4-206ENST00000587201 HMGN4O00479 90 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 UBDO15205 165 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 DIAPH2O60879 1101 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 IL6P05231 212 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 PABPC4LP0CB38 370 aaKnown RBP15.83■□□□□ 0.12
TPM4-206ENST00000587201 PCYT1AP49585 367 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 SELENBP1Q13228 472 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 ZNF239Q16600 458 aaKnown RBP15.83■□□□□ 0.12
TPM4-206ENST00000587201 SLC25A53Q5H9E4 307 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 ZFP90Q8TF47 636 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 OIT3Q8WWZ8 545 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 ROBO4Q8WZ75 1007 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 CPNE4Q96A23 557 aaPredicted RBP15.83■□□□□ 0.12
TPM4-206ENST00000587201 ZNF524Q96C55 264 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 WFIKKN1Q96NZ8 548 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 OR52B2Q96RD2 323 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 SRXN1Q9BYN0 137 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 SAP130Q9H0E3 1048 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 PLSCR4Q9NRQ2 329 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 CCM2LQ9NUG4 571 aaPredicted RBP15.83■□□□□ 0.12
TPM4-206ENST00000587201 KLHL28Q9NXS3 571 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 ZIM2Q9NZV7 527 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 SLC35A3Q9Y2D2 325 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 PLEKHA6Q9Y2H5 1048 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 TESMINQ9Y4I5 508 aa15.83■□□□□ 0.12
TPM4-206ENST00000587201 PRAMEF27A3QJZ7 478 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 C16orf97H3BN30 126 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 RFXANKO14593 260 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 H6PDO95479 791 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 NTN1O95631 604 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 HRGP04196 525 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 PGCP20142 388 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 DNASE1P24855 282 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 SLC7A1P30825 629 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 UGT2B10P36537 528 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 TXNL4AP83876 142 aaKnown RBP15.82■□□□□ 0.12
TPM4-206ENST00000587201 CHRNEQ04844 493 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 SYPL1Q16563 259 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 TIGD2Q4W5G0 525 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 HMGN2P46Q86SG4 172 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 PNPT1Q8TCS8 783 aaKnown RBP15.82■□□□□ 0.12
TPM4-206ENST00000587201 LRRC8CQ8TDW0 803 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 TMEM234Q8WY98 164 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 ST8SIA1Q92185 356 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 ZG16BQ96DA0 208 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 ATP6V1G3Q96LB4 118 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 MED18Q9BUE0 208 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 KLHL4Q9C0H6 718 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.82■□□□□ 0.12
TPM4-206ENST00000587201 ZNF226Q9NYT6 803 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 LIPT1Q9Y234 373 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 USH1CQ9Y6N9 552 aa15.82■□□□□ 0.12
TPM4-206ENST00000587201 A0A1W2PNR3 127 aa15.81■□□□□ 0.12
TPM4-206ENST00000587201 ETV2O00321 342 aaPredicted RBP15.81■□□□□ 0.12
TPM4-206ENST00000587201 ANP32DO95626 131 aa15.81■□□□□ 0.12
TPM4-206ENST00000587201 KRT75O95678 551 aa15.81■□□□□ 0.12
TPM4-206ENST00000587201 CD1EP15812 388 aa15.81■□□□□ 0.12
TPM4-206ENST00000587201 PGM1P36871 562 aa15.81■□□□□ 0.12
TPM4-206ENST00000587201 SESN3P58005 492 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms