RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 CYTIPO60759 359 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 DNAJA2O60884 412 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 EDNRAP25101 427 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 ASMTP46597 345 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 CCT3P49368 545 aaKnown RBP12.8□□□□□ -0.36
SDF2-202ENST00000585428 ATP12AP54707 1039 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 FAPQ12884 760 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 LASP1Q14847 261 aaKnown RBP12.8□□□□□ -0.36
SDF2-202ENST00000585428 TIMM23BQ5SRD1 257 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 LIPMQ5VYY2 423 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 CDC73Q6P1J9 531 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 R3HCC1LQ7Z5L2 792 aaKnown RBP12.8□□□□□ -0.36
SDF2-202ENST00000585428 PHC2Q8IXK0 858 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 ZNF527Q8NB42 609 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 ATP6V1C2Q8NEY4 427 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 OR7A2PQ8NGA2 310 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 ZFP90Q8TF47 636 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 NANOS1Q8WY41 292 aaKnown RBP12.8□□□□□ -0.36
SDF2-202ENST00000585428 C16orf45Q96MC5 204 aaPredicted RBP12.8□□□□□ -0.36
SDF2-202ENST00000585428 ACTRT3Q9BYD9 372 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 BARX1Q9HBU1 254 aaPredicted RBP12.8□□□□□ -0.36
SDF2-202ENST00000585428 KLHL9Q9P2J3 617 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 PRSS50Q9UI38 385 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 DTNAQ9Y4J8 743 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 A0A096LNT2 108 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 IGHV3-15A0A0B4J1V0 119 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 NPIPA5A0A0B4J1W7 369 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 A0A1W2PNR3 127 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 ZNF724A8MTY0 619 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 C9JVG2 144 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 NPIPA7E9PJI5 369 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 H3BNH8 94 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 GTPBP1O00178 669 aaKnown RBP12.79□□□□□ -0.36
SDF2-202ENST00000585428 GPRIN2O60269 458 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 EIF4E2O60573 245 aaKnown RBP12.79□□□□□ -0.36
SDF2-202ENST00000585428 LYZL6O75951 148 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 NUDT14O95848 222 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 NPIPA8P0DM63 369 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 LAMP1P11279 417 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 NEFHP12036 1026 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 ATP6V1C1P21283 382 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 IGHV1-2P23083 117 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 C21orf58P58505 322 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 RASGEF1BQ0VAM2 473 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 PPA1Q15181 289 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 NDUFAF6Q330K2 333 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 DCST2Q5T1A1 773 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 KANK2Q63ZY3 851 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 SSX8Q7RTT4 187 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 P2RY8Q86VZ1 359 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 IFT20Q8IY31 132 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 OR5W2Q8NH69 310 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 JADE3Q92613 823 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 ZNF775Q96BV0 537 aaPredicted RBP12.79□□□□□ -0.36
SDF2-202ENST00000585428 COQ8BQ96D53 544 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 MUCL1Q96DR8 90 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 RHNO1Q9BSD3 238 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 GATA5Q9BWX5 397 aaPredicted RBP12.79□□□□□ -0.36
SDF2-202ENST00000585428 GPATCH2Q9NW75 528 aa12.79□□□□□ -0.36
SDF2-202ENST00000585428 CHD3Q12873 2000 aaKnown RBP12.79□□□□□ -0.36
SDF2-202ENST00000585428 A8MV72 311 aaPredicted RBP12.78□□□□□ -0.36
SDF2-202ENST00000585428 SMAD9O15198 467 aaKnown RBP12.78□□□□□ -0.36
SDF2-202ENST00000585428 SSX4O60224 188 aa12.78□□□□□ -0.36
SDF2-202ENST00000585428 COX5AP20674 150 aa12.78□□□□□ -0.36
SDF2-202ENST00000585428 RNF144AP50876 292 aaPredicted RBP12.78□□□□□ -0.36
SDF2-202ENST00000585428 RPL38P63173 70 aaKnown RBP12.78□□□□□ -0.36
SDF2-202ENST00000585428 SELENBP1Q13228 472 aa12.78□□□□□ -0.36
SDF2-202ENST00000585428 ARL13AQ5H913 290 aaPredicted RBP12.78□□□□□ -0.36
SDF2-202ENST00000585428 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.78□□□□□ -0.36
SDF2-202ENST00000585428 C10orf107Q8IVU9 208 aa12.78□□□□□ -0.36
SDF2-202ENST00000585428 HOMEZQ8IX15 550 aa12.78□□□□□ -0.36
SDF2-202ENST00000585428 ZNF433Q8N7K0 673 aaPredicted RBP12.78□□□□□ -0.36
SDF2-202ENST00000585428 ADAMTS15Q8TE58 950 aa12.78□□□□□ -0.36
SDF2-202ENST00000585428 TMEM158Q8WZ71 300 aa12.78□□□□□ -0.36
SDF2-202ENST00000585428 OR5P2Q8WZ92 322 aa12.78□□□□□ -0.36
SDF2-202ENST00000585428 RADILQ96JH8 1075 aa12.78□□□□□ -0.36
SDF2-202ENST00000585428 HS6ST2Q96MM7 605 aa12.78□□□□□ -0.36
SDF2-202ENST00000585428 ZNF300Q96RE9 604 aaPredicted RBP12.78□□□□□ -0.36
SDF2-202ENST00000585428 SDF2Q99470 211 aa12.78□□□□□ -0.36
SDF2-202ENST00000585428 TRMOQ9BU70 441 aa12.78□□□□□ -0.36
SDF2-202ENST00000585428 ALG2Q9H553 416 aa12.78□□□□□ -0.36
SDF2-202ENST00000585428 FAIMQ9NVQ4 179 aa12.78□□□□□ -0.36
SDF2-202ENST00000585428 NPAP1Q9NZP6 1156 aa12.78□□□□□ -0.36
SDF2-202ENST00000585428 IGHV4-30-2A0A087WSY4 118 aa12.77□□□□□ -0.37
SDF2-202ENST00000585428 SCAMP2O15127 329 aaKnown RBP12.77□□□□□ -0.37
SDF2-202ENST00000585428 ZNF264O43296 627 aa12.77□□□□□ -0.37
SDF2-202ENST00000585428 TRIM13O60858 407 aa12.77□□□□□ -0.37
SDF2-202ENST00000585428 SHBGP04278 402 aa12.77□□□□□ -0.37
SDF2-202ENST00000585428 DDX5P17844 614 aaKnown RBP12.77□□□□□ -0.37
SDF2-202ENST00000585428 GGT1P19440 569 aa12.77□□□□□ -0.37
SDF2-202ENST00000585428 PTNP21246 168 aa12.77□□□□□ -0.37
SDF2-202ENST00000585428 SLC7A1P30825 629 aa12.77□□□□□ -0.37
SDF2-202ENST00000585428 IRX1P78414 480 aaPredicted RBP12.77□□□□□ -0.37
SDF2-202ENST00000585428 QPRTQ15274 297 aa12.77□□□□□ -0.37
SDF2-202ENST00000585428 NRF1Q16656 503 aa12.77□□□□□ -0.37
SDF2-202ENST00000585428 CHRFAM7AQ494W8 412 aa12.77□□□□□ -0.37
SDF2-202ENST00000585428 GALNTL6Q49A17 601 aa12.77□□□□□ -0.37
SDF2-202ENST00000585428 AGAP6Q5VW22 663 aa12.77□□□□□ -0.37
SDF2-202ENST00000585428 C11orf71Q6IPW1 123 aa12.77□□□□□ -0.37
SDF2-202ENST00000585428 NATD1Q8N6N6 113 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms