RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 EMC9Q9Y3B6 208 aa17.88■□□□□ 0.45
SHCBP1-203ENST00000564272 WDR45Q9Y484 360 aa17.88■□□□□ 0.45
SHCBP1-203ENST00000564272 ABCA4P78363 2273 aa17.88■□□□□ 0.45
SHCBP1-203ENST00000564272 PRAMEF27A3QJZ7 478 aa17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 CCDC154A6NI56 674 aa17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 SS18L1O75177 396 aaPredicted RBP17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 BCAS1O75363 584 aaPredicted RBP17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 NTN1O95631 604 aa17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 AGR2O95994 175 aa17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 GSNP06396 782 aa17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 UBTFL6P0CB48 400 aaPredicted RBP17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 ADH6P28332 368 aa17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 KCNJ5P48544 419 aa17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 CTBP2P56545 445 aa17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 CBFBQ13951 182 aa17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 ZNF239Q16600 458 aaKnown RBP17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 PDSS1Q5T2R2 415 aa17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 FRRS1Q6ZNA5 592 aa17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 ROBO4Q8WZ75 1007 aa17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 ZNF75CPQ92670 426 aaPredicted RBP17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 MRGPRX4Q96LA9 322 aa17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 OR52B2Q96RD2 323 aa17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 LAT2Q9GZY6 243 aa17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 CCM2LQ9NUG4 571 aaPredicted RBP17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 KLHL28Q9NXS3 571 aa17.87■□□□□ 0.45
SHCBP1-203ENST00000564272 UQCRHLA0A096LP55 91 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 HMGN4O00479 90 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 KLF11O14901 512 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 CSTAP01040 98 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 HRGP04196 525 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 IDO1P14902 403 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 UGT2B10P36537 528 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 CARD18P57730 90 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 EXOC3L2Q2M3D2 409 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 TMEM176BQ3YBM2 270 aaPredicted RBP17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 PDCD4Q53EL6 469 aaKnown RBP17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 GPAT3Q53EU6 434 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 DNAJC14Q6Y2X3 702 aaPredicted RBP17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 SPNS3Q6ZMD2 512 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 ZNF619Q8N2I2 560 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 TRIML2Q8N7C3 387 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 OR6K3Q8NGY3 331 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 PIWIL2Q8TC59 973 aaKnown RBP17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 PNPT1Q8TCS8 783 aaKnown RBP17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 NINJ1Q92982 152 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 WFIKKN1Q96NZ8 548 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 SLC39A3Q9BRY0 314 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 THUMPD3Q9BV44 507 aaKnown RBP17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 COQ10BQ9H8M1 238 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 POLE3Q9NRF9 147 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 ELOVL5Q9NYP7 299 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 NDRG3Q9UGV2 375 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 HIVEP1P15822 2718 aa17.86■□□□□ 0.45
SHCBP1-203ENST00000564272 A0A1W2PPR1 153 aa17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 GJE1A6NN92 205 aa17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 SLC22A3O75751 556 aa17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 H6PDO95479 791 aa17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 HPCAP84074 193 aa17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 SELENBP1Q13228 472 aa17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 SLC25A53Q5H9E4 307 aa17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 PAMR1Q6UXH9 720 aa17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 ZNF621Q6ZSS3 439 aa17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 EIF3MQ7L2H7 374 aaKnown RBP17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 ZNF550Q7Z398 422 aa17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 ANKFN1Q8N957 763 aa17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 GLB1L3Q8NCI6 653 aaPredicted RBP17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 RNF128Q8TEB7 428 aa17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 ZFP90Q8TF47 636 aa17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 ABHD3Q8WU67 409 aa17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 ZG16BQ96DA0 208 aa17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 SAP130Q9H0E3 1048 aa17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 QRSL1Q9H0R6 528 aaKnown RBP17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 SLC6A13Q9NSD5 602 aa17.85■□□□□ 0.45
SHCBP1-203ENST00000564272 ETV2O00321 342 aaPredicted RBP17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 CASKO14936 926 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 DIAPH2O60879 1101 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 DNAJA2O60884 412 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 GOSR1O95249 250 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 GUSBP08236 651 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 NID1P14543 1247 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 AGTR1P30556 359 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 PGM1P36871 562 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 PCYT1AP49585 367 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 PLAURQ03405 335 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 CHRNEQ04844 493 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 SYPL1Q16563 259 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 TIGD2Q4W5G0 525 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 TTMPQ5BVD1 217 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 COX20Q5RI15 118 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 FAM71CQ8NEG0 241 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 OR9I1Q8NGQ6 314 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 CPNE4Q96A23 557 aaPredicted RBP17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 MED18Q9BUE0 208 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 PLEKHF2Q9H8W4 249 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 GLRX2Q9NS18 164 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 C6orf203Q9P0P8 240 aaPredicted RBP17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 USH1CQ9Y6N9 552 aa17.84■□□□□ 0.45
SHCBP1-203ENST00000564272 A0A1W2PNR3 127 aa17.83■□□□□ 0.44
SHCBP1-203ENST00000564272 CLDN24A6NM45 220 aa17.83■□□□□ 0.44
SHCBP1-203ENST00000564272 C16orf97H3BN30 126 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms