RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ASIC5Q9NY37 505 aa20.13■□□□□ 0.81
ACTN1-220ENST00000556433 KLHL13Q9P2N7 655 aa20.13■□□□□ 0.81
ACTN1-220ENST00000556433 HEATR5AQ86XA9 2040 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 SERINC4A6NH21 518 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 H7C1Q1 480 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 UBL4AP11441 157 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 ENPP1P22413 925 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 CCR4P51679 360 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 SELENBP1Q13228 472 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 CBFBQ13951 182 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 QPRTQ15274 297 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 CHI3L2Q15782 390 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 SLC25A53Q5H9E4 307 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 CIARTQ8N365 385 aaPredicted RBP20.12■□□□□ 0.81
ACTN1-220ENST00000556433 ZNF781Q8N8C0 355 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 ZFP90Q8TF47 636 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 S100PBPQ96BU1 408 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 ZIM3Q96PE6 472 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 BDH2Q9BUT1 245 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 NMUR2Q9GZQ4 415 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 COQ10BQ9H8M1 238 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 GP6Q9HCN6 339 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 PCDHGB4Q9UN71 923 aa20.12■□□□□ 0.81
ACTN1-220ENST00000556433 PRR14LQ5THK1 2151 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 RNF103-CHMP3A0A140T963 221 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 FAM171A2A8MVW0 826 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 FCMRO60667 390 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 STX11O75558 287 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 CYP7B1O75881 506 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 AK1P00568 194 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 SERPINE1P05121 402 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 YES1P07947 543 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 SLC7A1P30825 629 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 ABCE1P61221 599 aaKnown RBP20.11■□□□□ 0.81
ACTN1-220ENST00000556433 TSC22D1Q15714 1073 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 KRT71Q3SY84 523 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 WDR93Q6P2C0 686 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 TFAP2EQ6VUC0 442 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 GABRG1Q8N1C3 465 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 SLC43A2Q8N370 569 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 ARL8AQ96BM9 186 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 SLC35G5Q96KT7 338 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 THUMPD3Q9BV44 507 aaKnown RBP20.11■□□□□ 0.81
ACTN1-220ENST00000556433 GSX2Q9BZM3 304 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 LAT2Q9GZY6 243 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 KCNE5Q9UJ90 142 aa20.11■□□□□ 0.81
ACTN1-220ENST00000556433 IGHV3-15A0A0B4J1V0 119 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 A0A1W2PNR3 127 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 ESPNB1AK53 854 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 RNASET2O00584 256 aaKnown RBP20.1■□□□□ 0.81
ACTN1-220ENST00000556433 GCM2O75603 506 aaPredicted RBP20.1■□□□□ 0.81
ACTN1-220ENST00000556433 LY6G6DO95868 133 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 MYZAPP0CAP1 466 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 PTH2RP49190 550 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 CASP9P55211 416 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 RAC3P60763 192 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 ZNF141Q15928 474 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 ARHGAP11BQ3KRB8 267 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 SFRP5Q5T4F7 317 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 OLIG3Q7RTU3 272 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 OR4A15Q8NGL6 344 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 TMEM171Q8WVE6 324 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 COX4I2Q96KJ9 171 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 TACO1Q9BSH4 297 aaKnown RBP20.1■□□□□ 0.81
ACTN1-220ENST00000556433 TMEM204Q9BSN7 226 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 DPY30Q9C005 99 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 EXD2Q9NVH0 621 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 MKLN1Q9UL63 735 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 RAP2CQ9Y3L5 183 aa20.1■□□□□ 0.81
ACTN1-220ENST00000556433 SMAD7O15105 426 aaKnown RBP20.09■□□□□ 0.81
ACTN1-220ENST00000556433 BIRC5O15392 142 aa20.09■□□□□ 0.81
ACTN1-220ENST00000556433 RGS16O15492 202 aaPredicted RBP20.09■□□□□ 0.81
ACTN1-220ENST00000556433 CPSF4O95639 269 aaKnown RBP20.09■□□□□ 0.81
ACTN1-220ENST00000556433 ADAP00813 363 aa20.09■□□□□ 0.81
ACTN1-220ENST00000556433 HEXAP06865 529 aa20.09■□□□□ 0.81
ACTN1-220ENST00000556433 IL32P24001 234 aa20.09■□□□□ 0.81
ACTN1-220ENST00000556433 ZNF844Q08AG5 666 aa20.09■□□□□ 0.81
ACTN1-220ENST00000556433 TIGD2Q4W5G0 525 aa20.09■□□□□ 0.81
ACTN1-220ENST00000556433 C16orf62Q7Z3J2 963 aa20.09■□□□□ 0.81
ACTN1-220ENST00000556433 ANKRD46Q86W74 232 aa20.09■□□□□ 0.81
ACTN1-220ENST00000556433 OR8J2Q8NGG1 315 aa20.09■□□□□ 0.81
ACTN1-220ENST00000556433 IGFBPL1Q8WX77 278 aa20.09■□□□□ 0.81
ACTN1-220ENST00000556433 QRSL1Q9H0R6 528 aaKnown RBP20.09■□□□□ 0.81
ACTN1-220ENST00000556433 OR51I1Q9H343 314 aa20.09■□□□□ 0.81
ACTN1-220ENST00000556433 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.09■□□□□ 0.812e-6■■■□□ 15.7
ACTN1-220ENST00000556433 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.09■□□□□ 0.81
ACTN1-220ENST00000556433 V9GYY5 206 aaPredicted RBP20.09■□□□□ 0.81
ACTN1-220ENST00000556433 CENPVL1A0A0U1RR11 272 aa20.08■□□□□ 0.81
ACTN1-220ENST00000556433 TRIM64A6NGJ6 449 aa20.08■□□□□ 0.81
ACTN1-220ENST00000556433 TRIM64BA6NI03 449 aa20.08■□□□□ 0.81
ACTN1-220ENST00000556433 ETV2O00321 342 aaPredicted RBP20.08■□□□□ 0.81
ACTN1-220ENST00000556433 HS3ST1O14792 307 aa20.08■□□□□ 0.81
ACTN1-220ENST00000556433 UGT2B17O75795 530 aa20.08■□□□□ 0.81
ACTN1-220ENST00000556433 CSTAP01040 98 aa20.08■□□□□ 0.81
ACTN1-220ENST00000556433 RPL14P50914 215 aaKnown RBP20.08■□□□□ 0.81
ACTN1-220ENST00000556433 SKP2Q13309 424 aa20.08■□□□□ 0.81
ACTN1-220ENST00000556433 ZNF611Q8N823 705 aa20.08■□□□□ 0.81
ACTN1-220ENST00000556433 VPS37AQ8NEZ2 397 aa20.08■□□□□ 0.81
ACTN1-220ENST00000556433 XAGE5Q8WWM1 108 aa20.08■□□□□ 0.81
ACTN1-220ENST00000556433 AKAP1Q92667 903 aaKnown RBP eCLIP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms