RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 LHFPL3Q86UP9 236 aa13.59□□□□□ -0.23
PPP4R3A-201ENST00000554308 KIF18BQ86Y91 864 aa13.59□□□□□ -0.23
PPP4R3A-201ENST00000554308 SLC38A6Q8IZM9 456 aa13.59□□□□□ -0.23
PPP4R3A-201ENST00000554308 OR2L13Q8N349 312 aa13.59□□□□□ -0.23
PPP4R3A-201ENST00000554308 FAM26EQ8N5C1 309 aa13.59□□□□□ -0.23
PPP4R3A-201ENST00000554308 RNFT2Q96EX2 444 aa13.59□□□□□ -0.23
PPP4R3A-201ENST00000554308 PEX11GQ96HA9 241 aa13.59□□□□□ -0.23
PPP4R3A-201ENST00000554308 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.59□□□□□ -0.23
PPP4R3A-201ENST00000554308 GPR55Q9Y2T6 319 aaPredicted RBP13.59□□□□□ -0.23
PPP4R3A-201ENST00000554308 SEC16AO15027 2179 aa13.59□□□□□ -0.23
PPP4R3A-201ENST00000554308 A0A1B0GVT2 93 aa13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 K7ESF4 209 aa13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 ZIC2O95409 532 aaPredicted RBP13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 RFX3P48380 749 aa13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 GIPRP48546 466 aa13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 AFF3P51826 1226 aaKnown RBP13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 AGFG1P52594 562 aaKnown RBP13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 CTBP2P56545 445 aa13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 SNAPC1Q16533 368 aa13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 RNLSQ5VYX0 342 aa13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 SUN5Q8TC36 379 aa13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 FGF11Q92914 225 aa13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 CLDN23Q96B33 292 aa13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 TCTN2Q96GX1 697 aa13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 TMED9Q9BVK6 235 aa13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 FNDC11Q9BVV2 318 aa13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 POLDIP3Q9BY77 421 aaKnown RBP13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 RBFOX1Q9NWB1 397 aaKnown RBP13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 SLC23A1Q9UHI7 598 aa13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 KLHL21Q9UJP4 597 aa13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 SLC13A4Q9UKG4 626 aa13.58□□□□□ -0.23
PPP4R3A-201ENST00000554308 PCDH15Q96QU1 1955 aa13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 UNC13CQ8NB66 2214 aa13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 ZDBF2Q9HCK1 2354 aa13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 FAM240BA0A1B0GVZ2 78 aa13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 DUXAA6NLW8 204 aa13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 LYRM1O43325 122 aa13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 TSC22D2O75157 780 aa13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 OR2B3O76000 313 aa13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 CT62P0C5K7 136 aa13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 MYL12AP19105 171 aa13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 OR1D5P58170 312 aa13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 C19orf57Q0VDD7 668 aa13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 DBPQ10586 325 aaPredicted RBP13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 GPR68Q15743 365 aa13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 DGAT2L6Q6ZPD8 337 aa13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 OR4K5Q8NGD3 323 aa13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 AHCYL2Q96HN2 611 aaKnown RBP13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 TRIM45Q9H8W5 580 aaPredicted RBP13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 MAN2C1Q9NTJ4 1040 aa13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 LIPT1Q9Y234 373 aa13.58□□□□□ -0.24
PPP4R3A-201ENST00000554308 C2orf92A0A1B0GVN3 265 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 SLC30A4O14863 429 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 OR10H2O60403 315 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 PIAS2O75928 621 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 C1QBP02746 253 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 LIMS3P0CW19 117 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 LIMS4P0CW20 117 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 UQCRC1P31930 480 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 TNK1Q13470 666 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 CDC73Q6P1J9 531 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 ZC3H14Q6PJT7 736 aaKnown RBP13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 LIX1LQ8IVB5 337 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 ANKRD9Q96BM1 317 aaPredicted RBP13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 MED30Q96HR3 178 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 ATF6BQ99941 703 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 SOSTQ9BQB4 213 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 WACQ9BTA9 647 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 PCED1AQ9H1Q7 454 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 RNF215Q9Y6U7 377 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 GTPBP1O00178 669 aaKnown RBP13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 SRPX2O60687 465 aaPredicted RBP13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 ATP1B1P05026 303 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 C14orf28Q4W4Y0 310 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 SLC36A4Q6YBV0 504 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 FAM109AQ8N4B1 249 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 MMABQ96EY8 250 aaPredicted RBP13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 FBXO34Q9NWN3 711 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 PTGFRNQ9P2B2 879 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 TEKT2Q9UIF3 430 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 WDR45Q9Y484 360 aa13.57□□□□□ -0.24
PPP4R3A-201ENST00000554308 A0A1W2PQ72 361 aa13.56□□□□□ -0.24
PPP4R3A-201ENST00000554308 FOXS1O43638 330 aa13.56□□□□□ -0.24
PPP4R3A-201ENST00000554308 ACP2P11117 423 aa13.56□□□□□ -0.24
PPP4R3A-201ENST00000554308 ARSBP15848 533 aa13.56□□□□□ -0.24
PPP4R3A-201ENST00000554308 SDHBP21912 280 aa13.56□□□□□ -0.24
PPP4R3A-201ENST00000554308 MLLT1Q03111 559 aaPredicted RBP13.56□□□□□ -0.24
PPP4R3A-201ENST00000554308 TPBGQ13641 420 aa13.56□□□□□ -0.24
PPP4R3A-201ENST00000554308 PRICKLE4Q2TBC4 344 aa13.56□□□□□ -0.24
PPP4R3A-201ENST00000554308 C3orf38Q5JPI3 329 aa13.56□□□□□ -0.24
PPP4R3A-201ENST00000554308 CLEC12AQ5QGZ9 265 aa13.56□□□□□ -0.24
PPP4R3A-201ENST00000554308 SLC25A45Q8N413 288 aa13.56□□□□□ -0.24
PPP4R3A-201ENST00000554308 OR8D4Q8NGM9 314 aa13.56□□□□□ -0.24
PPP4R3A-201ENST00000554308 UFD1Q92890 307 aa13.56□□□□□ -0.24
PPP4R3A-201ENST00000554308 KIAA1143Q96AT1 154 aaPredicted RBP13.56□□□□□ -0.24
PPP4R3A-201ENST00000554308 MAP6Q96JE9 813 aa13.56□□□□□ -0.24
PPP4R3A-201ENST00000554308 TMEM43Q9BTV4 400 aa13.56□□□□□ -0.24
PPP4R3A-201ENST00000554308 MED18Q9BUE0 208 aa13.56□□□□□ -0.24
PPP4R3A-201ENST00000554308 SPRTNQ9H040 489 aaPredicted RBP13.56□□□□□ -0.24
PPP4R3A-201ENST00000554308 C19orf53Q9UNZ5 99 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms