RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 CASC3O15234 703 aaKnown RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 HOXA3O43365 443 aaPredicted RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 AKAP8O43823 692 aaKnown RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 TBL1XO60907 577 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 GPX5O75715 221 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 LRATO95237 230 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 CLDN7O95471 211 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 POP4O95707 220 aaKnown RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 VIPP01282 170 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 DNTTP04053 509 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 HLA-DPB1P04440 258 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 H1F0P07305 194 aaKnown RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 C6P13671 934 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 SPNP16150 400 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 EPHA2P29317 976 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 PPP2R1BP30154 601 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 GABRA5P31644 462 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 CCR7P32248 378 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 ACSL1P33121 698 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 HSD17B2P37059 387 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 CRYBB2P43320 205 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 RFX2P48378 723 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 ARRB1P49407 418 aaPredicted RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 INPP1P49441 399 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 GZMKP49863 264 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 XKP51811 444 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 SMSP52788 366 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 ARFIP1P53367 373 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 AP2S1P53680 142 aaPredicted RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 PTTG1IPP53801 180 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 ATP12AP54707 1039 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 WNT4P56705 351 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 TMPRSS3P57727 454 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 PFN3P60673 137 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 DSTNP60981 165 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 TRA2BP62995 288 aaKnown RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 EEF1A2Q05639 463 aaKnown RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 PPP1R8Q12972 351 aaKnown RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 MRPL28Q13084 256 aaKnown RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 TP53BP2Q13625 1128 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 EFR3AQ14156 821 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 DOC2AQ14183 400 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 MLC1Q15049 377 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 SEC23BQ15437 767 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 SSX1Q16384 188 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 ZNF770Q6IQ21 691 aaPredicted RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 BHLHB9Q6PI77 547 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 CD200R1LQ6Q8B3 271 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 AGTRAPQ6RW13 159 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 KLHL17Q6TDP4 642 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 BAIAP2L2Q6UXY1 529 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 FAM83HQ6ZRV2 1179 aaPredicted RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 CACUL1Q86Y37 369 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 SNX29P2Q8IUI4 249 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 CCDC28AQ8IWP9 274 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 PHC2Q8IXK0 858 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 NRSN1Q8IZ57 195 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 SLC34A3Q8N130 599 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 NAGSQ8N159 534 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 KRT78Q8N1N4 520 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 C10orf111Q8N326 155 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 CLIP4Q8N3C7 705 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 CLDN19Q8N6F1 224 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 ZNF248Q8NDW4 579 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 GPR156Q8NFN8 814 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 FIBINQ8TAL6 211 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 TMEM163Q8TC26 289 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 SUN5Q8TC36 379 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 LKAAEAR1Q8TD35 194 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 GPR151Q8TDV0 419 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 SAP25Q8TEE9 199 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 OR5P2Q8WZ92 322 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 EXTL1Q92935 676 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 TMEM159Q96B96 161 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 OTULINQ96BN8 352 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 MOAP1Q96BY2 351 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 EID2BQ96D98 161 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 NEURL3Q96EH8 262 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 ALG14Q96F25 216 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 OTUB1Q96FW1 271 aaPredicted RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 PDXPQ96GD0 296 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 RADILQ96JH8 1075 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 RNF170Q96K19 258 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 ZNF514Q96K75 400 aaPredicted RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 ZNF578Q96N58 590 aaPredicted RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 SLC38A2Q96QD8 506 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 SDHCQ99643 169 aaPredicted RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 NIPSNAP1Q9BPW8 284 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 C7orf50Q9BRJ6 194 aaKnown RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 NMNAT1Q9HAN9 279 aaPredicted RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 KRCC1Q9NPI7 259 aaPredicted RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 ASB6Q9NWX5 421 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 PAQR5Q9NXK6 330 aaPredicted RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 B3GNT2Q9NY97 397 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 SLC25A13Q9UJS0 675 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 ACAD8Q9UKU7 415 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 NUP50Q9UKX7 468 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 ING4Q9UNL4 249 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 SLC22A14Q9Y267 594 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 HS3ST2Q9Y278 367 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms