RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 PTP4A3O75365 173 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 IFNGP01579 166 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 MT-ND5P03915 603 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 PEPDP12955 493 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 PRG2P13727 222 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 ZNF3P17036 446 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 NAT1P18440 290 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 DDOSTP39656 456 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 EVX1P49640 407 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 BIKQ13323 160 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 FZD5Q13467 585 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 BCL2A1Q16548 175 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 PYDC2Q56P42 97 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 ARHGAP11AQ6P4F7 1023 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 TMEM92Q6UXU6 159 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 WDR88Q6ZMY6 472 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 SIMC1Q8NDZ2 872 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 BBS1Q8NFJ9 593 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 OR51G2Q8NGK0 314 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 SLC37A2Q8TED4 501 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 SNX18Q96RF0 628 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 CCNL2Q96S94 520 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-205ENST00000553474 ATF6BQ99941 703 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 NDC1Q9BTX1 674 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 G6PC3Q9BUM1 346 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 ALG8Q9BVK2 526 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 TMED9Q9BVK6 235 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 IFT27Q9BW83 186 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 OR2B2Q9GZK3 357 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 PPP1R3EQ9H7J1 279 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-205ENST00000553474 MRPS2Q9Y399 296 aaKnown RBP11.94□□□□□ -0.5
SHMT2-205ENST00000553474 CACNA1IQ9P0X4 2223 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 SCN2AQ99250 2005 aa11.94□□□□□ -0.5
SHMT2-205ENST00000553474 DAPL1A0PJW8 107 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 GTPBP1O00178 669 aaKnown RBP11.93□□□□□ -0.5
SHMT2-205ENST00000553474 SOCS6O14544 535 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 OR10H2O60403 315 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 DNAJB6O75190 326 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 TRIM3O75382 744 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-205ENST00000553474 SLC2A10O95528 541 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 CBX7O95931 251 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 DCNP07585 359 aaKnown RBP11.93□□□□□ -0.5
SHMT2-205ENST00000553474 GKN3PP0CG01 181 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 SAGP10523 405 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-205ENST00000553474 CHRNB1P11230 501 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 GABRG2P18507 467 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 HK1P19367 917 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 SLC6A6P31641 620 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 LSSP48449 732 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 IGLV3-21P80748 117 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-205ENST00000553474 ZNF791Q3KP31 576 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-205ENST00000553474 RSBN1Q5VWQ0 802 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-205ENST00000553474 TRIQKQ629K1 86 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 VASNQ6EMK4 673 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 MZT2BQ6NZ67 158 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 PRSS41Q7RTY9 318 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 C11orf74Q86VG3 221 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 KLBQ86Z14 1044 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 ZNF595Q8IYB9 648 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 CAMKK1Q8N5S9 505 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 SYT14Q8NB59 555 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 SLC37A3Q8NCC5 494 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 TMEM52Q8NDY8 209 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 C19orf18Q8NEA5 215 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 OR13H1Q8NG92 308 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 PFN4Q8NHR9 129 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 KISS1RQ969F8 398 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-205ENST00000553474 PHOX2BQ99453 314 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 TEAD3Q99594 435 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 HDHD5Q9BXW7 423 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 RERGLQ9H628 205 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 C20orf141Q9NUB4 165 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 ZDBF2Q9HCK1 2354 aa11.93□□□□□ -0.5
SHMT2-205ENST00000553474 MEIOCA2RUB1 952 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 HMX3A6NHT5 357 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 M0R296 226 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 NTN1O95631 604 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 CT62P0C5K7 136 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 SLC2A2P11168 524 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-205ENST00000553474 RNH1P13489 461 aaKnown RBP11.92□□□□□ -0.5
SHMT2-205ENST00000553474 SLC2A5P22732 501 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 AZGP1P25311 298 aaKnown RBP11.92□□□□□ -0.5
SHMT2-205ENST00000553474 CD79BP40259 229 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 TGM4P49221 684 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 VSX2P58304 361 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-205ENST00000553474 PSG6Q00889 435 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 ID2Q02363 134 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 HHEXQ03014 270 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 ZNF141Q15928 474 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 KIAA0895LQ68EN5 471 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 HBMQ6B0K9 141 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 ULK3Q6PHR2 472 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 FIGNL1Q6PIW4 674 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 PAMR1Q6UXH9 720 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 LINC00114Q6XXX2 140 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 SLC22A18ASQ8N1D0 253 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 Q8N402 240 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 ARHGEF39Q8N4T4 335 aa11.92□□□□□ -0.5
SHMT2-205ENST00000553474 MS4A15Q8N5U1 240 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms